RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SLC39A9Q9NUM3 307 aa2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 TXNL4BQ9NX01 149 aaKnown RBP2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 HELZP42694 1942 aaKnown RBP2.59□□□□□ -1.99
FNDC3B-209ENST00000478016 TNRC6AQ8NDV7 1962 aaKnown RBP2.59□□□□□ -2
FNDC3B-209ENST00000478016 SCN1AP35498 2009 aa2.59□□□□□ -2
FNDC3B-209ENST00000478016 PHF3Q92576 2039 aaKnown RBP2.59□□□□□ -2
FNDC3B-209ENST00000478016 PLXNA4Q9HCM2 1894 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 PTPRSQ13332 1948 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 SCN5AQ14524 2016 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 IGKV1-27A0A075B6S5 117 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 TRAV9-2A0A087WT02 112 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 IGKV1D-43A0A0B4J1Z2 117 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 IGKV6D-41A0A0C4DH26 115 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 A0A0D9SFI3 127 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 A8MWL6 223 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 TCL1BO95988 128 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 IGKV1-5P01602 117 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 C1QAP02745 245 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 CD3DP04234 171 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 ZNF688P0C7X2 276 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 ZNF883P0CG24 379 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 IGLL1P15814 213 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 MT3P25713 68 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 ZNF136P52737 540 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 KRTAP10-9P60411 292 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 RPS21P63220 83 aaKnown RBP2.58□□□□□ -2
FNDC3B-209ENST00000478016 HBBP68871 147 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 NMSQ5H8A3 153 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 WDR38Q5JTN6 314 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 ZNF678Q5SXM1 525 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 Q6ZTC4 211 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 PRNTQ86SH4 94 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 SMIM29Q86T20 159 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 NFE4Q86UQ8 179 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 SLC25A29Q8N8R3 303 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 LINC01555Q8NAE3 123 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 WFDC11Q8NEX6 87 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 OR10G2Q8NGC3 310 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 OR8A1Q8NGG7 326 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 OR5C1Q8NGR4 320 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 OR5H2Q8NGV7 314 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 FAM57AQ8TBR7 257 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 LRRC29Q8WV35 223 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 GTSF1Q8WW33 167 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 FGF13Q92913 245 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 FAM104AQ969W3 186 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 CNRIP1Q96F85 164 aaPredicted RBP2.58□□□□□ -2
FNDC3B-209ENST00000478016 POLR2J2Q9GZM3 115 aaKnown RBP2.58□□□□□ -2
FNDC3B-209ENST00000478016 SDF2L1Q9HCN8 221 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 TNFRSF19Q9NS68 423 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 AIG1Q9NVV5 245 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
FNDC3B-209ENST00000478016 LSM2Q9Y333 95 aaKnown RBP2.58□□□□□ -2
FNDC3B-209ENST00000478016 KIF26AQ9ULI4 1882 aaPredicted RBP2.58□□□□□ -2
FNDC3B-209ENST00000478016 TRANK1O15050 2925 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 A0A087X002 238 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 TRAV19A0A0A6YYK7 116 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 IGHV4-61A0A0C4DH41 118 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 A0A1B0GW54 56 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 GRIFINA4D1Z8 144 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 ZFP92A6NM28 416 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 ZNF253O75346 499 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 NXPH4O95158 308 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 LTAP01374 205 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 IGKV3-20P01619 116 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 IGHV4-59P01825 116 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
FNDC3B-209ENST00000478016 IGHV3-43DP0DP04 118 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 TPT1P13693 172 aaKnown RBP2.57□□□□□ -2
FNDC3B-209ENST00000478016 VDAC1P21796 283 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 SSR2P43308 183 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 DAPP51397 102 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 NCBP2P52298 156 aaKnown RBP eCLIP2.57□□□□□ -2
FNDC3B-209ENST00000478016 NPC2P61916 151 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
FNDC3B-209ENST00000478016 RPL23P62829 140 aaKnown RBP2.57□□□□□ -2
FNDC3B-209ENST00000478016 CCL20P78556 96 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 WFDC2Q14508 124 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 ETDBQ3ZM63 59 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 C1orf100Q5SVJ3 147 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 ZC2HC1BQ5TFG8 222 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 SPATA12Q7Z6I5 190 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 GPHB5Q86YW7 130 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 SIGLECL1Q8N7X8 197 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 NKAPP1Q8N9T2 125 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 ABHD14BQ96IU4 210 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 OPRPNQ99935 248 aaPredicted RBP2.57□□□□□ -2
FNDC3B-209ENST00000478016 RHNO1Q9BSD3 238 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 ZNF492Q9P255 531 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 HHLA3Q9XRX5 114 aa2.57□□□□□ -2
FNDC3B-209ENST00000478016 KLK5Q9Y337 293 aaPredicted RBP2.57□□□□□ -2
FNDC3B-209ENST00000478016 RAI1Q7Z5J4 1906 aaPredicted RBP2.56□□□□□ -2
FNDC3B-209ENST00000478016 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
FNDC3B-209ENST00000478016 IGHV1OR15-1A0A075B7D0 117 aa2.56□□□□□ -2
FNDC3B-209ENST00000478016 KANTRA0A1W2PQU2 76 aa2.56□□□□□ -2
FNDC3B-209ENST00000478016 INS-IGF2F8WCM5 200 aa2.56□□□□□ -2
FNDC3B-209ENST00000478016 BUB1B-PAK6H3BSN5 160 aa2.56□□□□□ -2
FNDC3B-209ENST00000478016 K7EM74 188 aa2.56□□□□□ -2
FNDC3B-209ENST00000478016 TMEM256-PLSCR3K7ERE1 68 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms