RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 LINC00173Q6ZV60 143 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 ORMDL3Q8N138 153 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 PCNX3Q9H6A9 2034 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 NXT2Q9NPJ8 142 aaKnown RBP3.74□□□□□ -1.81
PTCD3-212ENST00000477520 DEPPQ9NTK1 212 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 DKK4Q9UBT3 224 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 EPDR1Q9UM22 224 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 FOXA2Q9Y261 457 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-212ENST00000477520 PTPRQQ9UMZ3 2332 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 MYO15AQ9UKN7 3530 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 FREM3P0C091 2139 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 IGLV3-12A0A075B6K2 115 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 LOC102723996A0A087X1L8 192 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 A0A1W2PNU3 283 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 TMEM30CPA0ZSE6 113 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 INS-IGF2F8WCM5 200 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 J3QT63 122 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 M0R2P5 195 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 UQCRQO14949 82 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 SCGB2A1O75556 95 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 OR2H2O95918 312 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 LTAP01374 205 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 CSN3P07498 182 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 SP1P08047 785 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 LGALS1P09382 135 aaKnown RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 MYOD1P15172 320 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 MYCNOSP40205 109 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 ID1P41134 155 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 FOLR3P41439 243 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 CCL11P51671 97 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 UBE2D3P61077 147 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 HSPE1P61604 102 aaKnown RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 UBE2D2P62837 147 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 CACNG7P62955 275 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 UBE2L3P68036 154 aaKnown RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 TNFAIP6P98066 277 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 TMEM30BQ3MIR4 351 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 C2orf83Q53S99 150 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 MIR17HGQ75NE6 70 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF329Q86UD4 541 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 OR8A1Q8NGG7 326 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 OR1L8Q8NGR8 309 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 HIST1H4GQ99525 98 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 PAXXQ9BUH6 204 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 SLC25A39Q9BZJ4 359 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-212ENST00000477520 SPRY4Q9C004 299 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 PRNDQ9UKY0 176 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 HHLA3Q9XRX5 114 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 SPTA1P02549 2419 aa3.73□□□□□ -1.81
PTCD3-212ENST00000477520 TNRC6AQ8NDV7 1962 aaKnown RBP3.72□□□□□ -1.81
PTCD3-212ENST00000477520 RP1L1Q8IWN7 2480 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-212ENST00000477520 CACNA1GO43497 2377 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 TRAV24A0A0B4J272 114 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 TRBV7-7A0A0K0K1E9 115 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 SH2D7A6NKC9 451 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-212ENST00000477520 H3BML4 177 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 K7EMI3 77 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 CEACAM4O75871 244 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 PRTN3P24158 256 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 COL8A2P25067 703 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 FCER1GP30273 86 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 MFAP4P55083 255 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 ATP5J2P56134 94 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 DSCR4P56555 118 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-212ENST00000477520 SPRNQ5BIV9 151 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 ACP7Q6ZNF0 438 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 PCP2Q8IVA1 136 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 ABHD12Q8N2K0 398 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 CIARTQ8N365 385 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-212ENST00000477520 OR13A1Q8NGR1 328 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 SSMEM1Q8WWF3 244 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 RASL10AQ92737 203 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 ZC2HC1AQ96GY0 325 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 PGLYRP4Q96LB8 373 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 NAA38Q9BRA0 125 aaKnown RBP3.72□□□□□ -1.81
PTCD3-212ENST00000477520 OR2H1Q9GZK4 316 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 UBTD1Q9HAC8 227 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 DNAH14Q0VDD8 3507 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 DOCK10Q96BY6 2186 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 MED13Q9UHV7 2174 aa3.72□□□□□ -1.81
PTCD3-212ENST00000477520 MPDZO75970 2070 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 TRBV7-3A0A075B6L6 115 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 TRAV8-2A0A0B4J237 113 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 TRAV12-1A0A0B4J245 112 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 C5orf63A6NC05 138 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 C15orf61A6NNL5 157 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 C17orf98A8MV24 154 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 C9JAW5 83 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 CCDC179H3BU77 68 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 KLK10O43240 276 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 SPINT2O43291 252 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 CRLF1O75462 422 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 RBP4P02753 201 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 IGKV2-30P06310 120 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 ZNF32P17041 273 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 HLA-DMBP28068 263 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 CFHR2P36980 270 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 INSL3P51460 131 aa3.71□□□□□ -1.82
PTCD3-212ENST00000477520 UBE2D1P51668 147 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms