RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 CCDC28AQ8IWP9 274 aa12.33□□□□□ -0.44
PCGF3-209ENST00000475288 TRAV6A0A075B6T7 132 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 PATE2Q6UY27 113 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 FLVCR2Q9UPI3 526 aa12.32□□□□□ -0.44
PCGF3-209ENST00000475288 RLN2P04090 185 aa12.31□□□□□ -0.44
PCGF3-209ENST00000475288 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
PCGF3-209ENST00000475288 HOXA5P20719 270 aa12.31□□□□□ -0.44
PCGF3-209ENST00000475288 POLR2GP62487 172 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCGF3-209ENST00000475288 TEPPQ6URK8 271 aa12.31□□□□□ -0.44
PCGF3-209ENST00000475288 TMEM14EPQ6UXP3 125 aa12.31□□□□□ -0.44
PCGF3-209ENST00000475288 C18orf15Q96N68 181 aa12.31□□□□□ -0.44
PCGF3-209ENST00000475288 ODF3Q96PU9 254 aa12.31□□□□□ -0.44
PCGF3-209ENST00000475288 SNURFLB1AK76 121 aa12.3□□□□□ -0.44
PCGF3-209ENST00000475288 DAZ2Q13117 558 aaKnown RBP12.3□□□□□ -0.44
PCGF3-209ENST00000475288 GFI1BQ5VTD9 330 aa12.3□□□□□ -0.44
PCGF3-209ENST00000475288 A0A0J9YY99 117 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 OR4E1P0C645 316 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 KIR3DS1Q14943 382 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 Q6ZRN7 208 aaPredicted RBP12.29□□□□□ -0.44
PCGF3-209ENST00000475288 ZNF546Q86UE3 836 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 BPIFA4PQ86YQ2 179 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 PYGO2Q9BRQ0 406 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 GPN1Q9HCN4 374 aaPredicted RBP12.29□□□□□ -0.44
PCGF3-209ENST00000475288 MGAT4CQ9UBM8 478 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
PCGF3-209ENST00000475288 GAGE12BA1L429 117 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 SSSCA1O60232 199 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 GAGE7O76087 117 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 TAS2R30P59541 319 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 OR10P1Q8NGE3 313 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 CHAC2Q8WUX2 184 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 GGACTQ9BVM4 153 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 ZNF586Q9NXT0 402 aa12.28□□□□□ -0.44
PCGF3-209ENST00000475288 C9orf170A2RU37 121 aa12.27□□□□□ -0.45
PCGF3-209ENST00000475288 TSC22D2O75157 780 aa12.27□□□□□ -0.45
PCGF3-209ENST00000475288 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.45
PCGF3-209ENST00000475288 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.45
PCGF3-209ENST00000475288 ZBTB8BQ8NAP8 495 aaPredicted RBP12.27□□□□□ -0.45
PCGF3-209ENST00000475288 ZNF431Q8TF32 576 aaPredicted RBP12.27□□□□□ -0.45
PCGF3-209ENST00000475288 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.45
PCGF3-209ENST00000475288 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 GOSR2O14653 212 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 CCNKO75909 580 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 METTL15P1P0C7V9 234 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 IGLC2P0DOY2 106 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 LEPP41159 167 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 LINC00315P59091 139 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 MITD1Q8WV92 249 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
PCGF3-209ENST00000475288 VSIG2Q96IQ7 327 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 TMPRSS5Q9H3S3 457 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 ALG5Q9Y673 324 aa12.26□□□□□ -0.45
PCGF3-209ENST00000475288 A0A096LPF7 62 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 PRAC2D3DTV9 90 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 NPIPB6E9PJ23 425 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 SLC17A3O00476 420 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 AGPAT2O15120 278 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
PCGF3-209ENST00000475288 PARD6GQ9BYG4 376 aaPredicted RBP12.25□□□□□ -0.45
PCGF3-209ENST00000475288 A0A1B0GVG6 124 aa12.24□□□□□ -0.45
PCGF3-209ENST00000475288 CT45A10P0DMU9 189 aa12.24□□□□□ -0.45
PCGF3-209ENST00000475288 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
PCGF3-209ENST00000475288 GUK1Q16774 197 aa12.24□□□□□ -0.45
PCGF3-209ENST00000475288 Q6ZTI0 123 aa12.24□□□□□ -0.45
PCGF3-209ENST00000475288 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
PCGF3-209ENST00000475288 LINC00467Q9BRT7 94 aa12.24□□□□□ -0.45
PCGF3-209ENST00000475288 VPS13BQ7Z7G8 4022 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 TRAV12-3A0A0B4J271 114 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 SIVA1O15304 175 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 COX7A2P2O60397 106 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 BCAP31P51572 246 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 OPCMLQ14982 345 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 SEC22CQ9BRL7 303 aa12.23□□□□□ -0.45
PCGF3-209ENST00000475288 FAT1Q14517 4588 aa12.22□□□□□ -0.45
PCGF3-209ENST00000475288 EREGO14944 169 aa12.22□□□□□ -0.45
PCGF3-209ENST00000475288 ZNF253O75346 499 aa12.22□□□□□ -0.45
PCGF3-209ENST00000475288 SLC25A5P05141 298 aaKnown RBP12.22□□□□□ -0.45
PCGF3-209ENST00000475288 C10orf113Q5VZT2 155 aa12.22□□□□□ -0.45
PCGF3-209ENST00000475288 C12orf45Q8N5I9 185 aaPredicted RBP12.22□□□□□ -0.45
PCGF3-209ENST00000475288 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
PCGF3-209ENST00000475288 MRPL53Q96EL3 112 aaKnown RBP12.22□□□□□ -0.45
PCGF3-209ENST00000475288 MGST2Q99735 147 aa12.22□□□□□ -0.45
PCGF3-209ENST00000475288 RCL1Q9Y2P8 373 aaKnown RBP12.22□□□□□ -0.45
PCGF3-209ENST00000475288 H3BQ15 152 aa12.21□□□□□ -0.45
PCGF3-209ENST00000475288 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.45
PCGF3-209ENST00000475288 ERVFC1-1P60608 527 aa12.21□□□□□ -0.45
PCGF3-209ENST00000475288 ARL16Q0P5N6 197 aa12.21□□□□□ -0.45
PCGF3-209ENST00000475288 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.45
PCGF3-209ENST00000475288 MORN5Q5VZ52 161 aa12.21□□□□□ -0.45
PCGF3-209ENST00000475288 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
PCGF3-209ENST00000475288 DMBT1Q9UGM3 2413 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms