RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NCALDP61601 193 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 OR10AC1Q8NH08 325 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 OR4K15Q8NH41 348 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 POPDC3Q9HBV1 291 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 MYLKQ15746 1914 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 ATRQ13535 2644 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 C2CD3Q4AC94 2353 aa0.3□□□□□ -2.36
CLK1-209ENST00000472679 MED14O60244 1454 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 MXRA5Q9NR99 2828 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 KCPQ6ZWJ8 1503 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 COL12A1Q99715 3063 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 CFAP46Q8IYW2 2715 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 CD14P08571 375 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 REEP5Q00765 189 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 FADDQ13158 208 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 AKIRIN2Q53H80 203 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 OR10AG1Q8NH19 301 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 ZHX1-C8orf76Q96EF9 292 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 HYLS1Q96M11 299 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 SPG11Q96JI7 2443 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 ZFHX3Q15911 3703 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 STAB2Q8WWQ8 2551 aa0.29□□□□□ -2.36
CLK1-209ENST00000472679 FAM208BQ5VWN6 2430 aa0.28□□□□□ -2.36
CLK1-209ENST00000472679 TLN2Q9Y4G6 2542 aa0.28□□□□□ -2.36
CLK1-209ENST00000472679 TRAV27A0A087WT01 109 aa0.28□□□□□ -2.36
CLK1-209ENST00000472679 CXCL1P09341 107 aa0.28□□□□□ -2.36
CLK1-209ENST00000472679 GVINP1Q7Z2Y8 2422 aa0.28□□□□□ -2.36
CLK1-209ENST00000472679 CFAP47Q6ZTR5 3102 aa0.28□□□□□ -2.37
CLK1-209ENST00000472679 BCL9O00512 1426 aa0.28□□□□□ -2.37
CLK1-209ENST00000472679 MKI67P46013 3256 aaKnown RBP0.28□□□□□ -2.37
CLK1-209ENST00000472679 SPEGQ15772 3267 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 ITPR2Q14571 2701 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 TGP01266 2768 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 ARPP19P56211 112 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 SPINK7P58062 85 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 ZNF714Q96N38 554 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 PHB2Q99623 299 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 TLN1Q9Y490 2541 aaKnown RBP0.27□□□□□ -2.37
CLK1-209ENST00000472679 KDM5CP41229 1560 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 NUP210LQ5VU65 1888 aa0.27□□□□□ -2.37
CLK1-209ENST00000472679 RELNP78509 3460 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 RIF1Q5UIP0 2472 aaKnown RBP0.26□□□□□ -2.37
CLK1-209ENST00000472679 HIVEP1P15822 2718 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 OTOGQ6ZRI0 2925 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 EYSQ5T1H1 3165 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 C9orf170A2RU37 121 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 K7ERJ3 54 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 SPINT3P49223 89 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 ASB4Q9Y574 426 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 SETBP1Q9Y6X0 1596 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 MGAM2Q2M2H8 2515 aa0.26□□□□□ -2.37
CLK1-209ENST00000472679 RANBP2P49792 3224 aaKnown RBP0.26□□□□□ -2.37
CLK1-209ENST00000472679 USH2AO75445 5202 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 DNAH12Q6ZR08 3092 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 BOD1L1Q8NFC6 3051 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 DSPP15924 2871 aaKnown RBP0.25□□□□□ -2.37
CLK1-209ENST00000472679 PIEZO2Q9H5I5 2752 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 EP300Q09472 2414 aaPredicted RBP0.25□□□□□ -2.37
CLK1-209ENST00000472679 CNOT1A5YKK6 2376 aaKnown RBP0.25□□□□□ -2.37
CLK1-209ENST00000472679 UBR2Q8IWV8 1755 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 KDM6BO15054 1643 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 ERBINQ96RT1 1412 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 NBPF19A0A087WUL8 3843 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 TRBV30A0A0K0K1B3 111 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 DUXBA0A1W2PPF3 345 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 C5orf67F2Z3F1 127 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 ZNF137PP52743 207 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 TMBIM6P55061 237 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 C6orf52Q5T4I8 152 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 ATOH7Q8N100 152 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 FAM103A1Q9BTL3 118 aaKnown RBP0.25□□□□□ -2.37
CLK1-209ENST00000472679 CACYBPQ9HB71 228 aaKnown RBP0.25□□□□□ -2.37
CLK1-209ENST00000472679 SPTBN5Q9NRC6 3674 aaKnown RBP0.25□□□□□ -2.37
CLK1-209ENST00000472679 LAMA3Q16787 3333 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 NBEAQ8NFP9 2946 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 CACNA1HO95180 2353 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 PCNX1Q96RV3 2341 aa0.25□□□□□ -2.37
CLK1-209ENST00000472679 PRRC2CQ9Y520 2896 aaKnown RBP0.24□□□□□ -2.37
CLK1-209ENST00000472679 NF1P21359 2839 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 CAMSAP1Q5T5Y3 1602 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 HMGXB3Q12766 1538 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 SPTAN1Q13813 2472 aaKnown RBP0.24□□□□□ -2.37
CLK1-209ENST00000472679 NDUFC2O95298 119 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 HSD11B1P28845 292 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 GNG5P63218 68 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 KLRD1Q13241 179 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 EIF3IQ13347 325 aaKnown RBP0.24□□□□□ -2.37
CLK1-209ENST00000472679 LRRC18Q8N456 261 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 PRNDQ9UKY0 176 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 MTORP42345 2549 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 IGF2RP11717 2491 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 ACANP16112 2415 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 CELSR2Q9HCU4 2923 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 MUC12Q9UKN1 5478 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 LRBAP50851 2863 aa0.24□□□□□ -2.37
CLK1-209ENST00000472679 KMT2AQ03164 3969 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 CELSR1Q9NYQ6 3014 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 CEP250Q9BV73 2442 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms