RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 H3BMG7 143 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BKO60814 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 UBL3O95164 117 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 SFT2D2O95562 160 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 CFDP00746 253 aaPredicted RBP2.04□□□□□ -2.08
CD46-213ENST00000471987 RBP4P02753 201 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 MT-ATP8P03928 68 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BJP06899 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HLA-DRB4P13762 266 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BOP23527 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BBP33778 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 POLR2IP36954 125 aaKnown RBP2.04□□□□□ -2.08
CD46-213ENST00000471987 ZNF138P52744 262 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BDP58876 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 LINC00313P59037 77 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BCP62807 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 KIAA0087Q14695 138 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST2H2BEQ16778 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 SPRNQ5BIV9 151 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.04□□□□□ -2.08
CD46-213ENST00000471987 CEP170Q5SW79 1584 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 OR2T2Q6IF00 324 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 PHF5AQ7RTV0 110 aaKnown RBP2.04□□□□□ -2.08
CD46-213ENST00000471987 PRNTQ86SH4 94 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 TEN1Q86WV5 123 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 DOCK4Q8N1I0 1966 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 TOPAZ1Q8N9V7 1692 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 PREX1Q8TCU6 1659 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BHQ93079 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 MAL2Q969L2 176 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 ABHD14BQ96IU4 210 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 IMMP2LQ96T52 175 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BNQ99877 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HIST1H2BMQ99879 126 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 TMEM243Q9BU79 118 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 AGPAT4-IT1Q9H0P7 198 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 CDK12Q9NYV4 1490 aaPredicted RBP2.04□□□□□ -2.08
CD46-213ENST00000471987 OR5V1Q9UGF6 321 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 RABAC1Q9UI14 185 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 RNF11Q9Y3C5 154 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 HLA-DRB4X5D2U9 266 aa2.04□□□□□ -2.08
CD46-213ENST00000471987 PLXNA4Q9HCM2 1894 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 KIDINS220Q9ULH0 1771 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 AHDC1Q5TGY3 1603 aaPredicted RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 ADCY10Q96PN6 1610 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 NKTRP30414 1462 aaKnown RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 IGKV1-27A0A075B6S5 117 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 A0A0J9YW62 118 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 TRBV27A0A0K0K1C4 114 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 LOC107986453A0A1B0GWG9 222 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 MCRIP1C9JLW8 97 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 M0R1X1 148 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 M0R378 163 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 SNCGO76070 127 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 NDUFB6O95139 128 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 GABARAPO95166 117 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 TRACP01848 142 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 TCRAP04437 139 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 SRP19P09132 144 aaKnown RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 ZNF705DP0CH99 300 aaPredicted RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 IGLC2P0DOY2 106 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 IGLC3P0DOY3 106 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 IGHV3-43DP0DP04 118 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 ADCYAP1P18509 176 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 UBE2AP49459 152 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 GABARAPL2P60520 117 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 GNG11P61952 73 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 SEC11AP67812 179 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 ADIRFQ15847 76 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 LGALS9BQ3B8N2 356 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 LGALSLQ3ZCW2 172 aaPredicted RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 TMEM155Q4W5P6 130 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 DNAJC24Q6P3W2 148 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 TMEM91Q6ZNR0 172 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 LINC00173Q6ZV60 143 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 MDP1Q86V88 176 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 BPIFA4PQ86YQ2 179 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 LINC00304Q8N9R0 145 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 OR5H2Q8NGV7 314 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 DCANP1Q8TF63 244 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 H1FXQ92522 213 aaKnown RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 RBMXL1Q96E39 390 aaKnown RBP2.03□□□□□ -2.08
CD46-213ENST00000471987 ZC2HC1AQ96GY0 325 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 C18orf15Q96N68 181 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 SHANK2-AS3Q9BTD1 123 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 PLEKHF2Q9H8W4 249 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 SLC39A9Q9NUM3 307 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 SCN1AP35498 2009 aa2.03□□□□□ -2.08
CD46-213ENST00000471987 LAMB1P07942 1786 aa2.03□□□□□ -2.09
CD46-213ENST00000471987 ITSN1Q15811 1721 aa2.03□□□□□ -2.09
CD46-213ENST00000471987 ARHGEF28Q8N1W1 1705 aaKnown RBP2.03□□□□□ -2.09
CD46-213ENST00000471987 NWD2Q9ULI1 1742 aa2.03□□□□□ -2.09
CD46-213ENST00000471987 DIP2CQ9Y2E4 1556 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 TNRC6AQ8NDV7 1962 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 HELZP42694 1942 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 TRBV20-1A0A075B6N2 111 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 A0A087WWC5 75 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 TRGV5A0A0B4J1U4 118 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 IGKV1D-43A0A0B4J1Z2 117 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms