RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 A0A096LNT2 108 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 A0A1W2PRS3 328 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 M0R036 132 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 PIAS1O75925 651 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 ERP29P30040 261 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 DIAPH2-AS1Q14236 149 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 VMA21Q3ZAQ7 101 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 Q5XG85 94 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 NAT14Q8WUY8 206 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 CACYBPQ9HB71 228 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 MRPL35Q9NZE8 188 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 KMT2CQ8NEZ4 4911 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 DSPPQ9NZW4 1301 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 PKD1L1Q8TDX9 2849 aa-0.93□□□□□ -2.56
COMMD3-209ENST00000471350 MAP3K5Q99683 1374 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 COL24A1Q17RW2 1714 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 IFNA7P01567 189 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 C5orf56Q8N8D9 126 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 GNPDA2Q8TDQ7 276 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 MAP1LC3BQ9GZQ8 125 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 RNASE7Q9H1E1 156 aaKnown RBP-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 SCN8AQ9UQD0 1980 aa-0.94□□□□□ -2.56
COMMD3-209ENST00000471350 AKAP6Q13023 2319 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 TRAV4A0A0B4J268 109 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 F2Z2F3 143 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 IFNA5P01569 189 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 IDO1P14902 403 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 HIST1H3AP68431 136 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 H3F3AP84243 136 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 KLKP1Q107X0 134 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 EDDM3AQ14507 147 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 HACD4Q5VWC8 232 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 DEFB132Q7Z7B7 95 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 PPTC7Q8NI37 304 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 BIN3Q9NQY0 253 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 PTPRQQ9UMZ3 2332 aa-0.95□□□□□ -2.56
COMMD3-209ENST00000471350 PIK3C2GO75747 1445 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 SOGA1O94964 1423 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 OBSL1O75147 1896 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 NBDYA0A0U1RRE5 68 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 HIGD1CA8MV81 97 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 RER1O15258 196 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 MPC1LP0DKB6 136 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 IMPG1Q17R60 797 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 OTUD6BQ8N6M0 293 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 ISOC1Q96CN7 298 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 DSCR8Q96T75 97 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 PARVBQ9HBI1 364 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 MYLKQ15746 1914 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 PLXND1Q9Y4D7 1925 aa-0.96□□□□□ -2.56
COMMD3-209ENST00000471350 ALMS1Q8TCU4 4167 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 MAP1BP46821 2468 aaKnown RBP-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 A0A087WUJ7 227 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 LOC101927531A0A1B0GV80 90 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 SMIM23A6NLE4 172 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 ATP5HO75947 161 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 ATP5G3P48201 142 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 SNCBQ16143 134 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 ZCCHC23Q6ZST2 131 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 EFCAB11Q9BUY7 163 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 LAMC3Q9Y6N6 1575 aa-0.97□□□□□ -2.56
COMMD3-209ENST00000471350 HECTD4Q9Y4D8 3996 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 CEP164Q9UPV0 1460 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 CADP27708 2225 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 BBIP1A8MTZ0 92 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 NFYBP25208 207 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 C3orf62Q6ZUJ4 267 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 PRELID3BQ9Y3B1 194 aa-0.98□□□□□ -2.57
COMMD3-209ENST00000471350 SETXQ7Z333 2677 aaKnown RBP-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 PTPRDP23468 1912 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 CREBBPQ92793 2442 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 A0A0G2JMM0 328 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 A0A1W2PPB8 328 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 KIR3DP1A8MWS1 328 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 HIST1H2BKO60814 126 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 CRHP06850 196 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 HIST1H2BJP06899 126 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 TMBIM6P55061 237 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 LINC00269Q8N2A0 174 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 FAM216BQ8N7L0 139 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 TPRKBQ9Y3C4 175 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 COL6A3P12111 3177 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 LRP1BQ9NZR2 4599 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 NCAPD3P42695 1498 aa-0.99□□□□□ -2.57
COMMD3-209ENST00000471350 PIEZO2Q9H5I5 2752 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 DOPEY2Q9Y3R5 2298 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 ACANP16112 2415 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 TRAV5A0A0B4J249 113 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 IGF2P01344 180 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 TPM3P06753 285 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 PHBP35232 272 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 ARPP19P56211 112 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 TRAPPC5Q8IUR0 188 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 TCTEX1D1Q8N7M0 179 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 BTF3L4Q96K17 158 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 BPESC1Q9GZL8 116 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 MRPL36Q9P0J6 103 aaKnown RBP-1□□□□□ -2.57
COMMD3-209ENST00000471350 ATP6V1DQ9Y5K8 247 aa-1□□□□□ -2.57
COMMD3-209ENST00000471350 H7BYZ3 331 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms