RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 C17orf100A8MU93 164 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 RNASE4P34096 147 aaKnown RBP11.47□□□□□ -0.57
HDAC7-219ENST00000470668 ID1P41134 155 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 Q8NFD4 153 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 B5MCH6 92 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 C1orf162Q8NEQ5 155 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-219ENST00000470668 GFRA4Q9GZZ7 299 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 CEACAM4O75871 244 aa11.46□□□□□ -0.57
HDAC7-219ENST00000470668 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
HDAC7-219ENST00000470668 LGALS9BQ3B8N2 356 aa11.46□□□□□ -0.57
HDAC7-219ENST00000470668 LGALS9CQ6DKI2 356 aa11.46□□□□□ -0.57
HDAC7-219ENST00000470668 MED12LQ86YW9 2145 aa11.46□□□□□ -0.57
HDAC7-219ENST00000470668 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
HDAC7-219ENST00000470668 FNDC10F2Z333 226 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 WFDC2Q14508 124 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.58
HDAC7-219ENST00000470668 PROK2Q9HC23 129 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.58
HDAC7-219ENST00000470668 SS18L2Q9UHA2 77 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 TIMM23O14925 209 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 PPP1R17O96001 155 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 NPYP01303 97 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 TMPRSS3P57727 454 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 ZNF562Q6V9R5 426 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 C8orf49Q96NF6 230 aa11.46□□□□□ -0.58
HDAC7-219ENST00000470668 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 H7C1H1 209 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 PLNP26678 52 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 C19orf54Q5BKX5 351 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 IGF2RP11717 2491 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 CT83Q5H943 113 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-219ENST00000470668 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 MORN5Q5VZ52 161 aa11.45□□□□□ -0.58
HDAC7-219ENST00000470668 DUX4L9Q6RFH8 374 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-219ENST00000470668 CDX4O14627 284 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-219ENST00000470668 NBR2O15453 112 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 C3orf36Q3SXR2 165 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 CEP295Q9C0D2 2601 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 WT1-ASQ06250 92 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 TMEM200BQ69YZ2 307 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-219ENST00000470668 TNRC6AQ8NDV7 1962 aaKnown RBP11.44□□□□□ -0.58
HDAC7-219ENST00000470668 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 BSPH1Q075Z2 132 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 C2orf82Q6UX34 121 aa11.44□□□□□ -0.58
HDAC7-219ENST00000470668 TLN1Q9Y490 2541 aaKnown RBP11.44□□□□□ -0.58
HDAC7-219ENST00000470668 SSBP2P81877 361 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-219ENST00000470668 ATP5G2Q06055 141 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 FAM120AOSQ5T036 256 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 ANKHD1Q8IWZ3 2542 aaKnown RBP11.43□□□□□ -0.58
HDAC7-219ENST00000470668 SRRM4A7MD48 611 aaKnown RBP11.43□□□□□ -0.58
HDAC7-219ENST00000470668 KLF5Q13887 457 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-219ENST00000470668 LY6EQ16553 131 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 TRBV20-1A0A075B6N2 111 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 EEF1AKMT3Q96AZ1 226 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 NCOR2Q9Y618 2525 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 SLC25A16P16260 332 aa11.43□□□□□ -0.58
HDAC7-219ENST00000470668 HTTP42858 3142 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 NDUFS7O75251 213 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 EFNA4P52798 201 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 Q6ZPA2 131 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 TP53TG3Q9ULZ0 132 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 KLF12Q9Y4X4 402 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 TECTAO75443 2155 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 HAX1O00165 279 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 CD7P09564 240 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 Q6ZR03 302 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 SCRT2Q9NQ03 307 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 TRGV3P03979 118 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 ERCC8Q13216 396 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 ZNF474Q6S9Z5 364 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-219ENST00000470668 CITED1Q99966 193 aa11.42□□□□□ -0.58
HDAC7-219ENST00000470668 CD59P13987 128 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 FXYD2P54710 66 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 C12orf74Q32Q52 190 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 NDUFA4L2Q9NRX3 87 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 OTOGLQ3ZCN5 2332 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 C2orf16Q68DN1 1984 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 CEND1Q8N111 149 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 TMEM75Q8N9X5 138 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 WIPF2Q8TF74 440 aaPredicted RBP11.41□□□□□ -0.58
HDAC7-219ENST00000470668 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
HDAC7-219ENST00000470668 CCL21O00585 134 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 ZNF295-AS1Q8N0V1 137 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
HDAC7-219ENST00000470668 C15orf65H3BRN8 121 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms