RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TCAPO15273 167 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 ATP6V0E1O15342 81 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 SH2D1AO60880 128 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 IGHV3-23P01764 117 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 CTSGP08311 255 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 NDPQ00604 133 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 SRSF2Q01130 221 aaKnown RBP6.23□□□□□ -1.41
SMC4-212ENST00000470240 ATP5G2Q06055 141 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 COL5A1-AS1Q5SY13 56 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 FAM223AQ8IWN6 122 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 DYNAPQ8N1N2 210 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 ZNF502Q8TBZ5 544 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 MRPL53Q96EL3 112 aaKnown RBP6.23□□□□□ -1.41
SMC4-212ENST00000470240 C17orf77Q96MU5 243 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 CCL19Q99731 98 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 ASCL2Q99929 193 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 HIF1ANQ9NWT6 349 aa6.23□□□□□ -1.41
SMC4-212ENST00000470240 MAP1BP46821 2468 aaKnown RBP6.23□□□□□ -1.41
SMC4-212ENST00000470240 ANKHD1Q8IWZ3 2542 aaKnown RBP6.23□□□□□ -1.41
SMC4-212ENST00000470240 CENPVL3A0A0U1RRI6 287 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 M0R3E3 92 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 GNLYP22749 145 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 BATFQ16520 125 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 KLK9Q2XQG4 91 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 CLEC2AQ6UVW9 174 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 SMIM15Q7Z3B0 74 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 COX8CQ7Z4L0 72 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 Q8N976 141 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 FER1L6-AS1Q8NA97 138 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 OR10AG1Q8NH19 301 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 CCDC140Q96MF4 163 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 KLK9Q9UKQ9 250 aa6.22□□□□□ -1.41
SMC4-212ENST00000470240 IGKV2-40A0A087WW87 121 aaPredicted RBP6.21□□□□□ -1.42
SMC4-212ENST00000470240 TRAV41A0A0B4J266 112 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 IGHV1-69DA0A0B4J2H0 117 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 FABP5P3A8MUU1 101 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 VWC2LB2RUY7 222 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 H3BUA1 57 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 IGKV2D-40P01614 121 aaPredicted RBP6.21□□□□□ -1.42
SMC4-212ENST00000470240 IGHV1-69P01742 117 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 APOHP02749 345 aaPredicted RBP6.21□□□□□ -1.42
SMC4-212ENST00000470240 PPBPP02775 128 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 CLEC3BP05452 202 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 ARMS2P0C7Q2 107 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 IGLC3P0DOY3 106 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 CTRLP40313 264 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 LMO4P61968 165 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 LCN12Q6JVE5 192 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 ZNF493Q6ZR52 646 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 C5orf56Q8N8D9 126 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 PRR25Q96S07 402 aa6.21□□□□□ -1.42
SMC4-212ENST00000470240 IGHV1-24A0A0C4DH33 117 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 OR4C46A6NHA9 309 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 OVOL3O00110 214 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 CRXO43186 299 aaPredicted RBP6.2□□□□□ -1.42
SMC4-212ENST00000470240 NDUFS7O75251 213 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 ORM1P02763 201 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 CSN3P07498 182 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 EGR2P11161 476 aaPredicted RBP6.2□□□□□ -1.42
SMC4-212ENST00000470240 CRIP2P52943 208 aaPredicted RBP6.2□□□□□ -1.42
SMC4-212ENST00000470240 HIST1H1AQ02539 215 aaPredicted RBP6.2□□□□□ -1.42
SMC4-212ENST00000470240 FAM120AOSQ5T036 256 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 EBLN2Q6P2I7 272 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 LYZL1Q6UWQ5 148 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 CLEC19AQ6UXS0 136 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 C9orf139Q6ZV77 190 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 MS4A6AQ9H2W1 248 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 MRPS16Q9Y3D3 137 aaKnown RBP6.2□□□□□ -1.42
SMC4-212ENST00000470240 ZNF292O60281 2723 aa6.2□□□□□ -1.42
SMC4-212ENST00000470240 TMSB15BA0A087X1C1 80 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 A0A1W2PPR1 153 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 C2orf70A6NJV1 201 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 BUB3O43684 328 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 TRGV3P03979 118 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 CKS2P33552 79 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 ARL3P36405 182 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 DSCR9P59020 149 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 RPL11P62913 178 aaKnown RBP6.19□□□□□ -1.42
SMC4-212ENST00000470240 PAX8Q06710 450 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 TWIST1Q15672 202 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 TDRG1Q3Y452 100 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 SAMD13Q5VXD3 122 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 FAM104BQ5XKR9 115 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 USMG5Q96IX5 58 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 PMCHL2Q9BQD1 86 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 MAP1LC3AQ9H492 121 aa6.19□□□□□ -1.42
SMC4-212ENST00000470240 WDFY4Q6ZS81 3184 aa6.18□□□□□ -1.42
SMC4-212ENST00000470240 TRAV40A0A0B4J280 105 aa6.18□□□□□ -1.42
SMC4-212ENST00000470240 A0A0G2JLM5 398 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms