RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 NRGNQ92686 78 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 CHD6Q8TD26 2715 aa5.87□□□□□ -1.47
COL6A3-208ENST00000468792 TRAV8-1A0A0A6YYK1 113 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 A0A1W2PS18 150 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 H3BTX0 84 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 K7EMT4 169 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 TGFAP01135 160 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 GHRHP01286 108 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 SNRPCP09234 159 aaKnown RBP5.86□□□□□ -1.47
COL6A3-208ENST00000468792 CT45A10P0DMU9 189 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 FABP4P15090 132 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 ARL3P36405 182 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 TPPP2P59282 170 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 RPS20P60866 119 aaKnown RBP5.86□□□□□ -1.47
COL6A3-208ENST00000468792 BLCAPP62952 87 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 KLF5Q13887 457 aaPredicted RBP5.86□□□□□ -1.47
COL6A3-208ENST00000468792 DEFB112Q30KQ8 113 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 PYY3Q5JQD4 70 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 SAMD13Q5VXD3 122 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 LCN12Q6JVE5 192 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 PRR27Q6MZM9 219 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 Q6YL49 198 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 PRNTQ86SH4 94 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 GTSF1Q8WW33 167 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 ZC2HC1AQ96GY0 325 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 MS4A10Q96PG2 267 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 PRR25Q96S07 402 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 LENEPQ9Y5L5 61 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 CREBBPQ92793 2442 aa5.86□□□□□ -1.47
COL6A3-208ENST00000468792 MXRA5Q9NR99 2828 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 ZANQ9Y493 2812 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 CSPG4Q6UVK1 2322 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 A1L4Q6 167 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 SH2D7A6NKC9 451 aaPredicted RBP5.85□□□□□ -1.47
COL6A3-208ENST00000468792 M0R3E3 92 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 CHEK1O14757 476 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 CA1P00915 261 aaPredicted RBP5.85□□□□□ -1.47
COL6A3-208ENST00000468792 APCSP02743 223 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 APOHP02749 345 aaPredicted RBP5.85□□□□□ -1.47
COL6A3-208ENST00000468792 PSMB8P28062 276 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 BMI1P35226 326 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 CRIP1P50238 77 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 HBBP68871 147 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 FOXE3Q13461 319 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 LY6EQ16553 131 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 Q5PR19 223 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 FAM162BQ5T6X4 162 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 GPHB5Q86YW7 130 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 TMEM86BQ8N661 226 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 RNF152Q8N8N0 203 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 GLMPQ8WWB7 406 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 GNB4Q9HAV0 340 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 NIT2Q9NQR4 276 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 VPREB3Q9UKI3 123 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 RPH3ALQ9UNE2 315 aa5.85□□□□□ -1.47
COL6A3-208ENST00000468792 TRBV7-9A0A0J9YWB2 115 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 ELANEP08246 267 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 FRMD6-AS1P0C7T7 363 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 TCL1AP56279 114 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 KRTAP10-9P60411 292 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 C9orf152Q5JTZ5 239 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 MRPL54Q6P161 138 aaKnown RBP5.84□□□□□ -1.47
COL6A3-208ENST00000468792 C9orf47Q6ZRZ4 202 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 KRTAP1-3Q8IUG1 177 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 Q8N2B8 174 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 OR2D3Q8NGH3 330 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 MYOZ3Q8TDC0 251 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 SGK494Q96LW2 274 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 PSMG3-AS1Q96PY0 264 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 NDFIP1Q9BT67 221 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 NPFFR1Q9GZQ6 430 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 TP53TG3Q9ULZ0 132 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 POLQO75417 2590 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 ABCA12Q86UK0 2595 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 CSMD2Q7Z408 3487 aa5.84□□□□□ -1.47
COL6A3-208ENST00000468792 TENM4Q6N022 2769 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 A0A1B0GUT8 65 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 IGHV4-59P01825 116 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 PF4V1P10720 104 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 LINC00310P59036 64 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 SLAQ13239 276 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 RIGQ13278 110 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 GDF5OSQ5U4N7 250 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 ZNF493Q6ZR52 646 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 C8orf86Q6ZUL3 223 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 OR4X2Q8NGF9 303 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 NOL4LQ96MY1 436 aaPredicted RBP5.83□□□□□ -1.48
COL6A3-208ENST00000468792 ASCL2Q99929 193 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 ALKBH7Q9BT30 221 aaPredicted RBP5.83□□□□□ -1.48
COL6A3-208ENST00000468792 CNFNQ9BYD5 112 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 KLK15Q9H2R5 256 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 GSN-AS1Q9NRJ2 163 aa5.83□□□□□ -1.48
COL6A3-208ENST00000468792 PEF1Q9UBV8 284 aaKnown RBP5.83□□□□□ -1.48
COL6A3-208ENST00000468792 TEX15Q9BXT5 2789 aa5.82□□□□□ -1.48
COL6A3-208ENST00000468792 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms