RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CCDC28AQ8IWP9 274 aa14.68□□□□□ -0.06
COL9A3-207ENST00000467819 GNPNAT1Q96EK6 184 aaPredicted RBP14.68□□□□□ -0.06
COL9A3-207ENST00000467819 KRTAP4-5Q9BYR2 181 aa14.68□□□□□ -0.06
COL9A3-207ENST00000467819 PXMP4Q9Y6I8 212 aa14.68□□□□□ -0.06
COL9A3-207ENST00000467819 TRAV26-1A0A087WT03 109 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 A0A0J9YY99 117 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 FAM25EA8MYX2 175 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 H3BQ15 152 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 IGLC2P0DOY2 106 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 ZNF846Q147U1 533 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 NRARPQ7Z6K4 114 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 C20orf85Q9H1P6 137 aa14.67□□□□□ -0.06
COL9A3-207ENST00000467819 TRAV5A0A0B4J249 113 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 GAGE12BA1L429 117 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 SNURFLB1AK76 121 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 GAGE7O76087 117 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 CST7O76096 145 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 GAGE12FP0CL80 117 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 GAGE12GP0CL81 117 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 GAGE12IP0CL82 117 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 CAV2P51636 162 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 RAB31Q13636 194 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 MIC13Q5XKP0 118 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 SAT2Q96F10 170 aaPredicted RBP14.66□□□□□ -0.06
COL9A3-207ENST00000467819 DNAJC4Q9NNZ3 241 aa14.66□□□□□ -0.06
COL9A3-207ENST00000467819 TRAV12-3A0A0B4J271 114 aa14.65□□□□□ -0.06
COL9A3-207ENST00000467819 RLN2P04090 185 aa14.65□□□□□ -0.06
COL9A3-207ENST00000467819 M6PRP20645 277 aa14.65□□□□□ -0.06
COL9A3-207ENST00000467819 CNPY1Q3B7I2 92 aa14.65□□□□□ -0.06
COL9A3-207ENST00000467819 Q6ZRG5 221 aa14.65□□□□□ -0.06
COL9A3-207ENST00000467819 LINC00612Q8N6U2 182 aa14.65□□□□□ -0.06
COL9A3-207ENST00000467819 CT45A10P0DMU9 189 aa14.64□□□□□ -0.07
COL9A3-207ENST00000467819 HOXA5P20719 270 aa14.64□□□□□ -0.07
COL9A3-207ENST00000467819 LEPP41159 167 aa14.64□□□□□ -0.07
COL9A3-207ENST00000467819 OR1L4Q8NGR5 311 aa14.64□□□□□ -0.07
COL9A3-207ENST00000467819 RXFP4Q8TDU9 374 aa14.64□□□□□ -0.07
COL9A3-207ENST00000467819 Q9H8V8 135 aa14.64□□□□□ -0.07
COL9A3-207ENST00000467819 C5orf51A6NDU8 294 aa14.63□□□□□ -0.07
COL9A3-207ENST00000467819 FAM24AA6NFZ4 105 aa14.63□□□□□ -0.07
COL9A3-207ENST00000467819 SEC22CQ9BRL7 303 aa14.63□□□□□ -0.07
COL9A3-207ENST00000467819 UQCC1Q9NVA1 299 aa14.63□□□□□ -0.07
COL9A3-207ENST00000467819 TRAV6A0A075B6T7 132 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 NPIPB6E9PJ23 425 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 PLA2G10O15496 165 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 LYRM1O43325 122 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 GUK1Q16774 197 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 ODF3Q96PU9 254 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 KRTAP1-5Q9BYS1 174 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 ZNF586Q9NXT0 402 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 WDR83OSQ9Y284 106 aa14.62□□□□□ -0.07
COL9A3-207ENST00000467819 UBE2L5PA0A1B0GUS4 154 aa14.61□□□□□ -0.07
COL9A3-207ENST00000467819 BAXQ07812 192 aa14.61□□□□□ -0.07
COL9A3-207ENST00000467819 ZNF431Q8TF32 576 aaPredicted RBP14.61□□□□□ -0.07
COL9A3-207ENST00000467819 ZNF503Q96F45 646 aa14.61□□□□□ -0.07
COL9A3-207ENST00000467819 PFDN5Q99471 154 aa14.61□□□□□ -0.07
COL9A3-207ENST00000467819 TMPRSS5Q9H3S3 457 aa14.61□□□□□ -0.07
COL9A3-207ENST00000467819 C11orf1Q9H5F2 150 aa14.61□□□□□ -0.07
COL9A3-207ENST00000467819 CDK2AP2O75956 126 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 TCRBP04435 133 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 S100A10P60903 97 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 TTC32Q5I0X7 151 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 Q6ZTI0 123 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 PYGO2Q9BRQ0 406 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 SLC39A9Q9NUM3 307 aa14.6□□□□□ -0.07
COL9A3-207ENST00000467819 APOBP04114 4563 aaKnown RBP14.6□□□□□ -0.07
COL9A3-207ENST00000467819 M0R3E3 92 aa14.59□□□□□ -0.07
COL9A3-207ENST00000467819 PVALBP20472 110 aaPredicted RBP14.59□□□□□ -0.07
COL9A3-207ENST00000467819 ERCC8Q13216 396 aa14.59□□□□□ -0.07
COL9A3-207ENST00000467819 ESRGQ1W209 222 aa14.59□□□□□ -0.07
COL9A3-207ENST00000467819 SPATA12Q7Z6I5 190 aa14.59□□□□□ -0.07
COL9A3-207ENST00000467819 C2orf50Q96LR7 162 aa14.59□□□□□ -0.07
COL9A3-207ENST00000467819 NUDT15Q9NV35 164 aa14.59□□□□□ -0.07
COL9A3-207ENST00000467819 IGSF23A1L1A6 192 aa14.58□□□□□ -0.08
COL9A3-207ENST00000467819 ZNF253O75346 499 aa14.58□□□□□ -0.08
COL9A3-207ENST00000467819 RPL29P47914 159 aaKnown RBP14.58□□□□□ -0.08
COL9A3-207ENST00000467819 DAZ2Q13117 558 aaKnown RBP14.58□□□□□ -0.08
COL9A3-207ENST00000467819 VWC2Q2TAL6 325 aa14.58□□□□□ -0.08
COL9A3-207ENST00000467819 C12orf45Q8N5I9 185 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-207ENST00000467819 MAPKAPK5-AS1Q8N8E1 139 aa14.58□□□□□ -0.08
COL9A3-207ENST00000467819 Q9H3A6 140 aa14.58□□□□□ -0.08
COL9A3-207ENST00000467819 TRBV19A0A075B6N1 114 aa14.57□□□□□ -0.08
COL9A3-207ENST00000467819 C7orf71A4D174 169 aa14.57□□□□□ -0.08
COL9A3-207ENST00000467819 SLC25A5P05141 298 aaKnown RBP14.57□□□□□ -0.08
COL9A3-207ENST00000467819 SULT1A1P50225 295 aa14.57□□□□□ -0.08
COL9A3-207ENST00000467819 MRPL53Q96EL3 112 aaKnown RBP14.57□□□□□ -0.08
COL9A3-207ENST00000467819 UPK3BQ9BT76 320 aa14.57□□□□□ -0.08
COL9A3-207ENST00000467819 GSN-AS1Q9NRJ2 163 aa14.57□□□□□ -0.08
COL9A3-207ENST00000467819 LYRM2Q9NU23 88 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-207ENST00000467819 MRPS16Q9Y3D3 137 aaKnown RBP14.57□□□□□ -0.08
COL9A3-207ENST00000467819 DNAH5Q8TE73 4624 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 TRGV2A0A075B6R0 118 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 H3BNG1 76 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 PYYP10082 97 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 FGF7P21781 194 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 S100A11P31949 105 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 BTN1A1Q13410 526 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 RAB32Q13637 225 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 STX12Q86Y82 276 aa14.56□□□□□ -0.08
COL9A3-207ENST00000467819 NDUFB4O95168 129 aa14.55□□□□□ -0.08
COL9A3-207ENST00000467819 HBG1P69891 147 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms