RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 TSC22D2O75157 780 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 GAGE7O76087 117 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 GAGE12FP0CL80 117 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 GAGE12GP0CL81 117 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 GAGE12IP0CL82 117 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 S100A7P31151 101 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 CCL18P55774 89 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 KRTAP10-2P60368 255 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 OR5I1Q13606 314 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 GSKIPQ9P0R6 139 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 H7BYZ3 331 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 GOSR2O14653 212 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 COX7A2P2O60397 106 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 CDK2AP2O75956 126 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 CT45A10P0DMU9 189 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 CXCL2P19875 107 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 SAT2Q96F10 170 aaPredicted RBP14.26□□□□□ -0.13
COL6A1-203ENST00000466285 TMPRSS5Q9H3S3 457 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 C11orf1Q9H5F2 150 aa14.26□□□□□ -0.13
COL6A1-203ENST00000466285 MIC13Q5XKP0 118 aa14.25□□□□□ -0.13
COL6A1-203ENST00000466285 ZNF493Q6ZR52 646 aa14.25□□□□□ -0.13
COL6A1-203ENST00000466285 SPATA12Q7Z6I5 190 aa14.25□□□□□ -0.13
COL6A1-203ENST00000466285 SLC50A1Q9BRV3 221 aa14.25□□□□□ -0.13
COL6A1-203ENST00000466285 TRAV12-3A0A0B4J271 114 aa14.24□□□□□ -0.13
COL6A1-203ENST00000466285 CLINT1Q14677 625 aa14.24□□□□□ -0.13
COL6A1-203ENST00000466285 ESRGQ1W209 222 aa14.24□□□□□ -0.13
COL6A1-203ENST00000466285 Q6ZTI0 123 aa14.24□□□□□ -0.13
COL6A1-203ENST00000466285 MITD1Q8WV92 249 aa14.24□□□□□ -0.13
COL6A1-203ENST00000466285 GNPNAT1Q96EK6 184 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-203ENST00000466285 Q9H8V8 135 aa14.24□□□□□ -0.13
COL6A1-203ENST00000466285 TAS2R30P59541 319 aa14.23□□□□□ -0.13
COL6A1-203ENST00000466285 C10orf113Q5VZT2 155 aa14.23□□□□□ -0.13
COL6A1-203ENST00000466285 BPIFA4PQ86YQ2 179 aa14.23□□□□□ -0.13
COL6A1-203ENST00000466285 RXFP4Q8TDU9 374 aa14.23□□□□□ -0.13
COL6A1-203ENST00000466285 ZNF586Q9NXT0 402 aa14.23□□□□□ -0.13
COL6A1-203ENST00000466285 NPIPB6E9PJ23 425 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 M0R3E3 92 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 CST7O76096 145 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 TCRBP04435 133 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 M6PRP20645 277 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 MZT2BQ6NZ67 158 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 ZNF431Q8TF32 576 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-203ENST00000466285 C20orf85Q9H1P6 137 aa14.22□□□□□ -0.13
COL6A1-203ENST00000466285 LSM5Q9Y4Y9 91 aaKnown RBP14.22□□□□□ -0.13
COL6A1-203ENST00000466285 FUSP35637 526 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL6A1-203ENST00000466285 ERCC8Q13216 396 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 PXDC1Q5TGL8 231 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 Q6ZQT7 251 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 NRARPQ7Z6K4 114 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 OR10J6PQ8NGY7 276 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 VSIG2Q96IQ7 327 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 C20orf144Q9BQM9 153 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 SEC22CQ9BRL7 303 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 Q9H3A6 140 aa14.21□□□□□ -0.13
COL6A1-203ENST00000466285 FAM24AA6NFZ4 105 aa14.2□□□□□ -0.14
COL6A1-203ENST00000466285 CAMLGP49069 296 aa14.2□□□□□ -0.14
COL6A1-203ENST00000466285 C11orf72Q8NBR9 251 aa14.2□□□□□ -0.14
COL6A1-203ENST00000466285 FAM240BA0A1B0GVZ2 78 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 RLN2P04090 185 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 DEFA1P59665 94 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 DEFA3P59666 94 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 BTN1A1Q13410 526 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 PRR9Q5T870 116 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 UPK3BQ9BT76 320 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 GGACTQ9BVM4 153 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 WDR83OSQ9Y284 106 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 MRPS16Q9Y3D3 137 aaKnown RBP14.19□□□□□ -0.14
COL6A1-203ENST00000466285 PXMP4Q9Y6I8 212 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 FAT1Q14517 4588 aa14.19□□□□□ -0.14
COL6A1-203ENST00000466285 UBE2L5PA0A1B0GUS4 154 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 IGSF23A1L1A6 192 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 NDUFB4O95168 129 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 CD300CQ08708 224 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 GCSAMLQ5JQS6 135 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 GSN-AS1Q9NRJ2 163 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 NUDT15Q9NV35 164 aa14.18□□□□□ -0.14
COL6A1-203ENST00000466285 HERC1Q15751 4861 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 TRAV6A0A075B6T7 132 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 A0A096LPF7 62 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 FAM25EA8MYX2 175 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 SNURFLB1AK76 121 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 PTTG1O95997 202 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 PYYP10082 97 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 CAV2P51636 162 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 ODF3Q96PU9 254 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 DNAJC4Q9NNZ3 241 aa14.17□□□□□ -0.14
COL6A1-203ENST00000466285 L7N2F9 121 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 LEPP41159 167 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 BCAP31P51572 246 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 VAMP2P63027 116 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 VWC2Q2TAL6 325 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 S100A7AQ86SG5 101 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 CCDC28AQ8IWP9 274 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 Q8N1X5 172 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 ENKURQ8TC29 256 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 ZNF503Q96F45 646 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 FAM19A4Q96LR4 140 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 MARVELD1Q9BSK0 173 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 KLF12Q9Y4X4 402 aa14.16□□□□□ -0.14
COL6A1-203ENST00000466285 TRBV19A0A075B6N1 114 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms