RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 C2CD3Q4AC94 2353 aa14.43□□□□□ -0.1
CCDC78-206ENST00000463539 TSPAN4O14817 238 aa14.43□□□□□ -0.1
CCDC78-206ENST00000463539 MT-ND4LP03901 98 aa14.43□□□□□ -0.1
CCDC78-206ENST00000463539 RNF212Q495C1 297 aa14.43□□□□□ -0.1
CCDC78-206ENST00000463539 ARL6IP6Q8N6S5 226 aa14.43□□□□□ -0.1
CCDC78-206ENST00000463539 NRN1Q9NPD7 142 aa14.43□□□□□ -0.1
CCDC78-206ENST00000463539 C2orf70A6NJV1 201 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 HLA-DMBP28068 263 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 TCF24Q7RTU0 167 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 BAGE2Q86Y30 109 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 RNF182Q8N6D2 247 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 RAX2Q96IS3 184 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 C16orf92Q96LL3 132 aa14.42□□□□□ -0.1
CCDC78-206ENST00000463539 TRAV8-1A0A0A6YYK1 113 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 TRAV8-2A0A0B4J237 113 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 SERTM2A0A1B0GWG4 89 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 K7EN84 100 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 M0QZ24 198 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 CBLN1P23435 193 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 TMEM75Q8N9X5 138 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 PEMTQ9UBM1 199 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 A0A1B0GUS0 222 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 IGLV2-8P01709 118 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 PRB4P10163 310 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-206ENST00000463539 FHL3Q13643 280 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 LCN12Q6JVE5 192 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 NHLRC2Q8NBF2 726 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 OR9G4Q8NGQ1 327 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 CTDSP1Q9GZU7 261 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 CLEC5AQ9NY25 188 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 SELENOKQ9Y6D0 94 aa14.41□□□□□ -0.1
CCDC78-206ENST00000463539 IGKV3-7A0A075B6H7 116 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 CCL24O00175 119 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 LTAP01374 205 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 IGLV2-11P01706 119 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 MGST1P10620 155 aaKnown RBP14.4□□□□□ -0.1
CCDC78-206ENST00000463539 FOLR2P14207 255 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 Q86TA4 180 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 DLX4Q92988 240 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-206ENST00000463539 SFRP2Q96HF1 295 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 TMEM242Q9NWH2 141 aa14.4□□□□□ -0.1
CCDC78-206ENST00000463539 ZNF705FA8MVS1 300 aaPredicted RBP14.39□□□□□ -0.11
CCDC78-206ENST00000463539 PSG3Q16557 428 aa14.39□□□□□ -0.11
CCDC78-206ENST00000463539 MRPL53Q96EL3 112 aaKnown RBP14.39□□□□□ -0.11
CCDC78-206ENST00000463539 SMIM12Q96EX1 92 aa14.39□□□□□ -0.11
CCDC78-206ENST00000463539 NIPBLQ6KC79 2804 aaeCLIP14.39□□□□□ -0.11
CCDC78-206ENST00000463539 IGKV2-40A0A087WW87 121 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-206ENST00000463539 TRBV6-1A0A0K0K1D8 114 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 H7BYZ3 331 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 SOCS3O14543 225 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 IGKV2D-40P01614 121 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-206ENST00000463539 FLI1Q01543 452 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-206ENST00000463539 OR5I1Q13606 314 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 PRNTQ86SH4 94 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 ANAPC16Q96DE5 110 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 TUBA4BQ9H853 241 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 CXorf65A6NEN9 183 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 SAMD13Q5VXD3 122 aa14.38□□□□□ -0.11
CCDC78-206ENST00000463539 JMJD1CQ15652 2540 aa14.37□□□□□ -0.11
CCDC78-206ENST00000463539 GCGP01275 180 aa14.37□□□□□ -0.11
CCDC78-206ENST00000463539 PSG8Q9UQ74 426 aa14.37□□□□□ -0.11
CCDC78-206ENST00000463539 PPP1R2P9O14990 202 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 ERVFC1-1P60608 527 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 ADAMTSL5Q6ZMM2 481 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.36□□□□□ -0.11
CCDC78-206ENST00000463539 MLXQ9UH92 298 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 FBLL1A6NHQ2 334 aaKnown RBP14.36□□□□□ -0.11
CCDC78-206ENST00000463539 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 KRTAP10-3P60369 221 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 NSUN5P1Q3KNT7 163 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 GBGT1Q8N5D6 347 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 OR10G8Q8NGN5 311 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 MLST8Q9BVC4 326 aa14.36□□□□□ -0.11
CCDC78-206ENST00000463539 MAST4O15021 2626 aa14.35□□□□□ -0.11
CCDC78-206ENST00000463539 ADARB2-AS1A8MUL3 147 aa14.35□□□□□ -0.11
CCDC78-206ENST00000463539 TMEM183AQ8IXX5 376 aa14.35□□□□□ -0.11
CCDC78-206ENST00000463539 C20orf173Q96LM9 149 aa14.35□□□□□ -0.11
CCDC78-206ENST00000463539 MS4A6AQ9H2W1 248 aa14.35□□□□□ -0.11
CCDC78-206ENST00000463539 ZFP30Q9Y2G7 519 aa14.35□□□□□ -0.11
CCDC78-206ENST00000463539 RBAKDNA6NC62 111 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 FOXL1Q12952 345 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 PRR27Q6MZM9 219 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 NDUFA11Q86Y39 141 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 C15orf54Q8N8G6 183 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 ZNF738Q8NE65 137 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 DCANP1Q8TF63 244 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 VGLL1Q99990 258 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 RNASE7Q9H1E1 156 aaKnown RBP14.34□□□□□ -0.11
CCDC78-206ENST00000463539 URGCP-MRPS24S4R325 110 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 TEP1Q99973 2627 aaKnown RBP14.34□□□□□ -0.11
CCDC78-206ENST00000463539 CSN3P07498 182 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 ID1P41134 155 aa14.34□□□□□ -0.11
CCDC78-206ENST00000463539 IBA57Q5T440 356 aaKnown RBP14.33□□□□□ -0.12
CCDC78-206ENST00000463539 WFDC3Q8IUB2 231 aa14.33□□□□□ -0.12
CCDC78-206ENST00000463539 BIN3Q9NQY0 253 aa14.33□□□□□ -0.12
CCDC78-206ENST00000463539 OSTCQ9NRP0 149 aa14.33□□□□□ -0.12
CCDC78-206ENST00000463539 TFPI2P48307 235 aa14.32□□□□□ -0.12
CCDC78-206ENST00000463539 FAM24BQ8N5W8 94 aa14.32□□□□□ -0.12
CCDC78-206ENST00000463539 DYNLRB2Q8TF09 96 aa14.32□□□□□ -0.12
CCDC78-206ENST00000463539 ASCL2Q99929 193 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms