RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 IL4P05112 153 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 LINC00614P0C842 121 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 FOSL1P15407 271 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 NTF3P20783 257 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 UBE2E1P51965 193 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 EFNA4P52798 201 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 SSBP2P81877 361 aaPredicted RBP3.71□□□□□ -1.82
VPS72-203ENST00000463470 SLAQ13239 276 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 KRTAP21-3Q3LHN1 58 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 SPATA45Q537H7 98 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 Q56UQ5 140 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 C11orf71Q6IPW1 123 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 SIGLEC15Q6ZMC9 328 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 ZNF493Q6ZR52 646 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 GOLT1AQ6ZVE7 132 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 SPATA12Q7Z6I5 190 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 PRNTQ86SH4 94 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 NIT1Q86X76 327 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 Q8N6K4 173 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 FAM110DQ8TAY7 271 aaPredicted RBP3.71□□□□□ -1.82
VPS72-203ENST00000463470 MRPL53Q96EL3 112 aaKnown RBP3.71□□□□□ -1.82
VPS72-203ENST00000463470 ZNF414Q96IQ9 312 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 RITA1Q96K30 269 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 LINC00479Q96M42 142 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 SLC50A1Q9BRV3 221 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 FAM103A1Q9BTL3 118 aaKnown RBP3.71□□□□□ -1.82
VPS72-203ENST00000463470 MAP1LC3CQ9BXW4 147 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 MS4A6AQ9H2W1 248 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 TPSG1Q9NRR2 321 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 MRPL36Q9P0J6 103 aaKnown RBP3.71□□□□□ -1.82
VPS72-203ENST00000463470 RABAC1Q9UI14 185 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 FBXL7Q9UJT9 491 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 PSG8Q9UQ74 426 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 LAMTOR2Q9Y2Q5 125 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 PAM16Q9Y3D7 125 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 ATRQ13535 2644 aa3.71□□□□□ -1.82
VPS72-203ENST00000463470 DNHD1Q96M86 4753 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 ACANP16112 2415 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 A0A087X0K7 114 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 TRBV7-1A0A0A6YYK4 115 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 A0A1B0GV90 55 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 TMEM189A5PLL7 270 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 SH2D7A6NKC9 451 aaPredicted RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 NCBP2LA6PVI3 153 aaKnown RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 F2Z2F3 143 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 LEPROTL1O95214 131 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 BRI3O95415 125 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 PLAUP00749 431 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 IGLC3P0DOY3 106 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 TMEM11P17152 192 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 CTRLP40313 264 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 HNRNPA3P51991 378 aaKnown RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 RIPPLY3P57055 190 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 ARF6P62330 175 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 RPL11P62913 178 aaKnown RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 GNG5P63218 68 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 SLC35B1P78383 322 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 RELQ04864 619 aaPredicted RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 KIAA1644Q3SXP7 199 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 SAMD13Q5VXD3 122 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 RNASEKQ6P5S7 137 aaKnown RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 VMO1Q7Z5L0 202 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 OR10AG1Q8NH19 301 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 FAM168AQ92567 244 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 DPF1Q92782 380 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 PGLYRP4Q96LB8 373 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 ASCL2Q99929 193 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 SNHG12Q9BXW3 62 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 NPFFR1Q9GZQ6 430 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 GSX1Q9H4S2 264 aaPredicted RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 AP5S1Q9NUS5 200 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 RPH3ALQ9UNE2 315 aa3.7□□□□□ -1.82
VPS72-203ENST00000463470 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
VPS72-203ENST00000463470 VPS13CQ709C8 3753 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 COL6A5A8TX70 2615 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 IGHV2-70DA0A0C4DH43 119 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 A6NNC1 897 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 H3BUA1 57 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 SYS1-DBNDD2H3BUS1 97 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 ZNF561-AS1K7EIQ3 104 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 NDUFS8O00217 210 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
VPS72-203ENST00000463470 CA1P00915 261 aaPredicted RBP3.69□□□□□ -1.82
VPS72-203ENST00000463470 IGHV3-48P01763 117 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 CNTFRP26992 372 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 C12orf54Q6X4T0 127 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 Q6ZN92 141 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 FA2HQ7L5A8 372 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 TCF24Q7RTU0 167 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 SMIM15Q7Z3B0 74 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 PRSS3P2Q8NHM4 247 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 GTSF1Q8WW33 167 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 EEF1AKMT3Q96AZ1 226 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 RCHY1Q96PM5 261 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 SIRPDQ9H106 197 aa3.69□□□□□ -1.82
VPS72-203ENST00000463470 PPP1R14DQ9NXH3 145 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms