RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CACNA1DQ01668 2161 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 LINC01549A6NIU2 74 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GHRHP01286 108 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 IGHV4-39P01824 125 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
NUP58-206ENST00000463407 POLEQ07864 2286 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 CST9LQ9H4G1 147 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE12BA1L429 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE7O76087 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 PAX9P55771 341 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE1Q13065 139 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE4Q13068 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE5Q13069 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 GAGE13Q4V321 117 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 SLC25A2Q9BXI2 301 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 CTSZQ9UBR2 303 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 ZNF134P52741 427 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 NPC2P61916 151 aa10.23□□□□□ -0.77
NUP58-206ENST00000463407 IGHV4-38-2P0DP08 117 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 SSBP2P81877 361 aaPredicted RBP10.22□□□□□ -0.77
NUP58-206ENST00000463407 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 MRPL27Q9P0M9 148 aaKnown RBP10.22□□□□□ -0.77
NUP58-206ENST00000463407 MPDZO75970 2070 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 CCL24O00175 119 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 SPRNQ5BIV9 151 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 TRAV12-2A0A075B6T6 113 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 C6orf226Q5I0X4 101 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 TMEM75Q8N9X5 138 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 C8orf49Q96NF6 230 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 MS4A6AQ9H2W1 248 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 DKK4Q9UBT3 224 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 TRAV9-2A0A087WT02 112 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 ARMS2P0C7Q2 107 aa10.22□□□□□ -0.77
NUP58-206ENST00000463407 TRBV24-1A0A075B6N3 115 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 FAM90A2PQ658T7 463 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 RASL10AQ92737 203 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 PLNP26678 52 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 A0A1B0GV90 55 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 LINC00479Q96M42 142 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 JPT2Q9H910 190 aa10.21□□□□□ -0.77
NUP58-206ENST00000463407 C1orf194Q5T5A4 169 aa10.21□□□□□ -0.78
NUP58-206ENST00000463407 PRORYQ9H606 182 aa10.21□□□□□ -0.78
NUP58-206ENST00000463407 TSPAN13O95857 204 aa10.21□□□□□ -0.78
NUP58-206ENST00000463407 TYMSP04818 313 aa10.21□□□□□ -0.78
NUP58-206ENST00000463407 IGFBPL1Q8WX77 278 aa10.21□□□□□ -0.78
NUP58-206ENST00000463407 PAX2Q02962 417 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 IGHV7-4-1A0A0J9YVY3 117 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 IGLV3-1P01715 115 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 C10orf105Q8TEF2 133 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 LRRK1Q38SD2 2015 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 SMKR1H3BMG3 65 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 LIME1Q9H400 295 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 IGKV1-39P01597 117 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 IGKV1D-39P04432 117 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 DEFB136Q30KP8 78 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 TMEM95Q3KNT9 176 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 GSN-AS1Q9NRJ2 163 aa10.2□□□□□ -0.78
NUP58-206ENST00000463407 DAZAP2Q15038 168 aaPredicted RBP10.19□□□□□ -0.78
NUP58-206ENST00000463407 TRPT1Q86TN4 253 aaKnown RBP10.19□□□□□ -0.78
NUP58-206ENST00000463407 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
NUP58-206ENST00000463407 SMPXQ9UHP9 88 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 H3BUA1 57 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 EREGO14944 169 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 PAX4O43316 350 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 SPCS1Q9Y6A9 102 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 A0A1B0GWB2 263 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 CDKN1BP46527 198 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 SEC11AP67812 179 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 ZNF407Q9C0G0 2248 aa10.19□□□□□ -0.78
NUP58-206ENST00000463407 COLCA2A8K830 154 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 LINC00587B1AMM8 73 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 WT1-ASQ06250 92 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 C9orf66Q5T8R8 295 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 SFTA2Q6UW10 78 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 CENPVL3A0A0U1RRI6 287 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 PFN1P07737 140 aaKnown RBP10.18□□□□□ -0.78
NUP58-206ENST00000463407 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 TRBV19A0A075B6N1 114 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 CGB3P0DN86 165 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 HOXD3P31249 432 aaPredicted RBP10.18□□□□□ -0.78
NUP58-206ENST00000463407 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
NUP58-206ENST00000463407 ADAMTS9Q9P2N4 1935 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 H3BRN7 92 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 H3BUT2 72 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 LOC105371267A0A1B0GV96 52 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 C11orf53Q8IXP5 236 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 HIST1H2BLQ99880 126 aa10.17□□□□□ -0.78
NUP58-206ENST00000463407 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms