RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 MUC4Q99102 2169 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 CHD3Q12873 2000 aaKnown RBP0.23□□□□□ -2.37
KDM3A-208ENST00000463013 PTPRFP10586 1907 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
KDM3A-208ENST00000463013 URB1O60287 2271 aaKnown RBP0.22□□□□□ -2.37
KDM3A-208ENST00000463013 PKDREJQ9NTG1 2253 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 ANKARQ7Z5J8 1434 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 ANKRD50Q9ULJ7 1429 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 SPAG17Q6Q759 2223 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 A0A0D9SG52 128 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 A0A1B0GV50 99 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 SPAARA0A1B0GVQ0 90 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 CXCR6O00574 342 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 CNBPP62633 177 aaKnown RBP0.22□□□□□ -2.37
KDM3A-208ENST00000463013 LELP1Q5T871 98 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 DPPA3Q6W0C5 159 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 Q6ZS49 121 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 BPIFA4PQ86YQ2 179 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 FAM9CQ8IZT9 166 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 DEFB124Q8NES8 71 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 OR4E2Q8NGC2 313 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 GINS4Q9BRT9 223 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 ACER3Q9NUN7 267 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 CEP192Q8TEP8 1941 aa0.22□□□□□ -2.37
KDM3A-208ENST00000463013 ASCC3Q8N3C0 2202 aaKnown RBP0.22□□□□□ -2.37
KDM3A-208ENST00000463013 DAPK1P53355 1430 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 KNL1Q8NG31 2342 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 RFX7Q2KHR2 1363 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 MYO7AQ13402 2215 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 MYLKQ15746 1914 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 TRBV6-8A0A0A6YYG3 113 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 TRAV1-1A0A0B4J248 108 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 LCE6AA0A183 80 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 IGKV1-5P01602 117 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 COX6A1P12074 109 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 TMEM156Q8N614 296 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 TET1Q8NFU7 2136 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 MRPL30Q8TCC3 161 aaKnown RBP0.21□□□□□ -2.38
KDM3A-208ENST00000463013 RAB8BQ92930 207 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 OPTNQ96CV9 577 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 TMEM70Q9BUB7 260 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 ULBP3Q9BZM4 244 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 MIXL1Q9H2W2 232 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 CD163L1Q9NR16 1453 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 ABCA4P78363 2273 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 EDC4Q6P2E9 1401 aaKnown RBP0.21□□□□□ -2.38
KDM3A-208ENST00000463013 HELZP42694 1942 aaKnown RBP0.21□□□□□ -2.38
KDM3A-208ENST00000463013 MYH13Q9UKX3 1938 aa0.21□□□□□ -2.38
KDM3A-208ENST00000463013 OBSL1O75147 1896 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 ROCK1Q13464 1354 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 PDCD11Q14690 1871 aaKnown RBP0.2□□□□□ -2.38
KDM3A-208ENST00000463013 ZGRF1Q86YA3 2104 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 RTL9Q8NET4 1388 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 FOCADQ5VW36 1801 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 SPEF2Q9C093 1822 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 DSTQ03001 7570 aaKnown RBP0.2□□□□□ -2.38
KDM3A-208ENST00000463013 MCM3APO60318 1980 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 A0A1W2PPM0 123 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 M0QZ92 97 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 KCNK1O00180 336 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 PIN1P1O15428 100 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 UBL3O95164 117 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 PRH1P02810 166 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 BAALC-AS2P0C853 105 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 RPS12P25398 132 aaKnown RBP0.2□□□□□ -2.38
KDM3A-208ENST00000463013 ASIPP42127 132 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 SSR2P43308 183 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 RHOGP84095 191 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 SFXN4Q6P4A7 337 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 MIR17HGQ75NE6 70 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 CLVS1Q8IUQ0 354 aaPredicted RBP0.2□□□□□ -2.38
KDM3A-208ENST00000463013 OR13C4Q8NGS5 318 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 TMEM147Q9BVK8 224 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 C10orf95Q9H7T3 257 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 FGFR1OP2Q9NVK5 253 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 TP73-AS1Q9UF72 201 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 AKAP6Q13023 2319 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 DOCK1Q14185 1865 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 VPS8Q8N3P4 1428 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 ABCA1O95477 2261 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 KIAA1549LQ6ZVL6 1849 aa0.2□□□□□ -2.38
KDM3A-208ENST00000463013 GOLGA4Q13439 2230 aaKnown RBP0.19□□□□□ -2.38
KDM3A-208ENST00000463013 RTL1A6NKG5 1358 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 NUP155O75694 1391 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 EIF3AQ14152 1382 aaKnown RBP0.19□□□□□ -2.38
KDM3A-208ENST00000463013 CCNB3Q8WWL7 1395 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 IBTKQ9P2D0 1353 aaPredicted RBP0.19□□□□□ -2.38
KDM3A-208ENST00000463013 ANKRD36CQ5JPF3 1778 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 KRTAP2-3P0C7H8 128 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 HLA-EP13747 358 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 CASQ1P31415 396 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 RAB5BP61020 215 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 RHEBQ15382 184 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 KHDC3LQ587J8 217 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 LRRC25Q8N386 305 aaPredicted RBP0.19□□□□□ -2.38
KDM3A-208ENST00000463013 OR5A1Q8NGJ0 315 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 TERB2Q8NHR7 220 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 SFT2D1Q8WV19 159 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 KLK6Q92876 244 aa0.19□□□□□ -2.38
KDM3A-208ENST00000463013 BORCS5Q969J3 196 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms