RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 J3QRE1 110 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 RBP4P02753 201 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 SLC25A5P05141 298 aaKnown RBP1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 HLA-DRB4P13762 266 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 CKS2P33552 79 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 AKR1D1P51857 326 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 RPS25P62851 125 aaKnown RBP1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 BLCAPP62952 87 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 BRD3OSQ6XYD6 125 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 ARPINQ7Z6K5 226 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 CLECL1Q8IZS7 167 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 ARL11Q969Q4 196 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 HLA-DRB4X5D2U9 266 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 PXDNLA1KZ92 1463 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 SMARCA4P51532 1647 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 ZSWIM8A7E2V4 1837 aa1.79□□□□□ -2.12
SPTLC1-203ENST00000461132 ANAPC1Q9H1A4 1944 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 N4BP2Q86UW6 1770 aaPredicted RBP1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 WDR7Q9Y4E6 1490 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 IGKV2D-26A0A0A0MRZ7 120 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 FAM25AB3EWG3 89 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 FAM25CB3EWG5 89 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 FAM25GB3EWG6 89 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 TSPAN19P0C672 248 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 IGLC6P0CF74 106 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 GUCA1AP43080 201 aaPredicted RBP1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 PCBD1P61457 104 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 PDE6HQ13956 83 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 WHAMMP3Q1A5X7 153 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 GLYATL3Q5SZD4 288 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 C1orf134Q5TEV5 83 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 C10orf111Q8N326 155 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 Q8N814 137 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 OR10AC1Q8NH08 325 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 CLEC2BQ92478 149 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 CST11Q9H112 138 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 LPAR5Q9H1C0 372 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 NIT2Q9NQR4 276 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 ERG28Q9UKR5 140 aa1.78□□□□□ -2.12
SPTLC1-203ENST00000461132 MYO5AQ9Y4I1 1855 aaKnown RBP1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 ARHGEF11O15085 1522 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 NISCHQ9Y2I1 1504 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 TCOF1Q13428 1488 aaKnown RBP1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 A0A087WSZ3 146 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 C2orf70A6NJV1 201 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 ZNF727A8MUV8 499 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 CXCL8P10145 99 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 SLC25A4P12235 298 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 DNAJB13P59910 316 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 DIAPH2-AS1Q14236 149 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 TMEM91Q6ZNR0 172 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 TEN1Q86WV5 123 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 GKN2Q86XP6 184 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 ATOH7Q8N100 152 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 CCL4L1Q8NHW4 92 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 Q96M85 177 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 CGREF1Q99674 301 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 SMIM7Q9BQ49 75 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 TAF9BQ9HBM6 251 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 SAR1AQ9NR31 198 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 FKBP11Q9NYL4 201 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 TNFSF18Q9UNG2 199 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 MPDZO75970 2070 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 ANKRD31Q8N7Z5 1873 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 TRPM1Q7Z4N2 1603 aa1.77□□□□□ -2.13
SPTLC1-203ENST00000461132 PEG3Q9GZU2 1588 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 TNS3Q68CZ2 1445 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 NCOA3Q9Y6Q9 1424 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 CUL9Q8IWT3 2517 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 FER1L6Q2WGJ9 1857 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 C3orf85A0A1B0GTC6 90 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 CDC42EP2O14613 210 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 HYPMO75409 117 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 APOC1P02654 83 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 CD2P06729 351 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 LINC00694P0DN24 101 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 RRAS2P62070 204 aaPredicted RBP1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 ASB16-AS1Q495Z4 193 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 FAM74A1Q5RGS3 127 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 FP248Q71RG6 208 aaPredicted RBP1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 COA5Q86WW8 74 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 OR5AS1Q8N127 324 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 COMMD3Q9UBI1 195 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 METTL1Q9UBP6 276 aaKnown RBP1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 DISP1Q96F81 1524 aa1.76□□□□□ -2.13
SPTLC1-203ENST00000461132 FAM135BQ49AJ0 1406 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 CCDC88CQ9P219 2028 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 IGHV1-24A0A0C4DH33 117 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 LOC107984156A0A0G2JMH3 177 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 NPFFO15130 113 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 IGLV1-51P01701 117 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 S100A1P23297 94 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 SNRPD3P62318 126 aaKnown RBP1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 EMX2Q04743 252 aa1.75□□□□□ -2.13
SPTLC1-203ENST00000461132 NEDD8Q15843 81 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms