RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 A0A1B0GW15 77 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 IGHV4-38-2P0DP08 117 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 IER3P46695 156 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 BRD3OSQ6XYD6 125 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 LINC00479Q96M42 142 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 CCDC140Q96MF4 163 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 HIST1H2BLQ99880 126 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 GPR61Q9BZJ8 451 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
ERCC3-205ENST00000460485 ANK3Q12955 4377 aaKnown RBP10.95□□□□□ -0.66
ERCC3-205ENST00000460485 RBAKDNA6NC62 111 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 IFITM10A6NMD0 228 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 H3BUX3 64 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 WIPF1O43516 503 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 CRISP2P16562 243 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 CBLN1P23435 193 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 FAM162BQ5T6X4 162 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 CYB5R2Q6BCY4 276 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 C16orf54Q6UWD8 224 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 TOMM20LQ6UXN7 152 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
ERCC3-205ENST00000460485 IGLV2-11P01706 119 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 CLEC3BP05452 202 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 FABP4P15090 132 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 PRR27Q6MZM9 219 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 RBPMS2Q6ZRY4 209 aaKnown RBP10.93□□□□□ -0.66
ERCC3-205ENST00000460485 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 NHLRC2Q8NBF2 726 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 OR10D4PQ8NGN7 298 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 NDFIP1Q9BT67 221 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 PSG8Q9UQ74 426 aa10.93□□□□□ -0.66
ERCC3-205ENST00000460485 G3V318 75 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 HAX1O00165 279 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 NDUFA4O00483 81 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 BUB3O43684 328 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 TRGV3P03979 118 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-205ENST00000460485 HBBP68871 147 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
ERCC3-205ENST00000460485 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 PRNTQ86SH4 94 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 TMEM219Q86XT9 240 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 NUP35Q8NFH5 326 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 NEU1Q99519 415 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 GNB4Q9HAV0 340 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 NIT2Q9NQR4 276 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 S4R3C0 116 aa10.92□□□□□ -0.66
ERCC3-205ENST00000460485 A0A1B0GXF2 115 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 AMBPP02760 352 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 PPIFP30405 207 aaKnown RBP10.91□□□□□ -0.66
ERCC3-205ENST00000460485 TPPP2P59282 170 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 RPS20P60866 119 aaKnown RBP10.91□□□□□ -0.66
ERCC3-205ENST00000460485 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 U3KQE9 123 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 ANK2Q01484 3957 aa10.91□□□□□ -0.66
ERCC3-205ENST00000460485 IGHV3OR16-10A0A075B7F0 116 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
ERCC3-205ENST00000460485 A0A1W2PS18 150 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 H3BTX0 84 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 FSHBP01225 129 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 APCSP02743 223 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 ARL3P36405 182 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 TCL1AP56279 114 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 JOSD1Q15040 202 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-205ENST00000460485 C9orf152Q5JTZ5 239 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
ERCC3-205ENST00000460485 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 CD5LO43866 347 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 BMI1P35226 326 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 RAB4BP61018 213 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 PYY3Q5JQD4 70 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 MRPL54Q6P161 138 aaKnown RBP10.89□□□□□ -0.67
ERCC3-205ENST00000460485 BORCS7Q96B45 105 aa10.89□□□□□ -0.67
ERCC3-205ENST00000460485 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 CHEK1O14757 476 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 CR1P17927 2039 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 CFHR3Q02985 330 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 RIGQ13278 110 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 KRTAP24-1Q3LI83 254 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 PDZD11Q5EBL8 140 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 BAGE3Q86Y29 109 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 PPP1R14DQ9NXH3 145 aa10.88□□□□□ -0.67
ERCC3-205ENST00000460485 TRAV8-1A0A0A6YYK1 113 aa10.87□□□□□ -0.67
ERCC3-205ENST00000460485 LINC01548A6NM66 108 aa10.87□□□□□ -0.67
ERCC3-205ENST00000460485 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
ERCC3-205ENST00000460485 KLF5Q13887 457 aaPredicted RBP10.87□□□□□ -0.67
ERCC3-205ENST00000460485 LY6EQ16553 131 aa10.87□□□□□ -0.67
ERCC3-205ENST00000460485 IQCJQ1A5X6 159 aa10.87□□□□□ -0.67
ERCC3-205ENST00000460485 MS4A10Q96PG2 267 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms