RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SRSF1Q07955 248 aaKnown RBP eCLIP4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 LGALS9BQ3B8N2 356 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 RUSC1-AS1Q66K80 236 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 LGALS9CQ6DKI2 356 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 PRNTQ86SH4 94 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 TTC9CQ8N5M4 171 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 DEFB125Q8N687 156 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 PIFOQ8TCI5 191 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 ZC2HC1AQ96GY0 325 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 ZNF747Q9BV97 191 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 FBXL15Q9H469 300 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 AAMDCQ9H7C9 122 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 AP5S1Q9NUS5 200 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 THYN1Q9P016 225 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 DPM3Q9P2X0 92 aa4.83□□□□□ -1.64
UBQLN4-202ENST00000459954 UNC79Q9P2D8 2635 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 IGLV11-55A0A075B6I3 123 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 IGHV3-72A0A0B4J1Y9 119 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 CCL25O15444 150 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 TCF21O43680 179 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 TOX4O94842 621 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 CT45A10P0DMU9 189 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 RPL7P18124 248 aaKnown RBP4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 CNTFRP26992 372 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 RAB9AP51151 201 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 SEC11AP67812 179 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 EBI3Q14213 229 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 FBLN7Q53RD9 439 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 BVES-AS1Q5T3Y7 98 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 CCDC144NLQ6NUI1 221 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 ZNF562Q6V9R5 426 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 FA2HQ7L5A8 372 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 ATOH7Q8N100 152 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 KIR3DL3Q8N743 410 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 CFHR4Q92496 578 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 RNF125Q96EQ8 232 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 TMUB1Q9BVT8 246 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 CLEC5AQ9NY25 188 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 RPH3ALQ9UNE2 315 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 TACC2O95359 2948 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 NOTCH2Q04721 2471 aa4.82□□□□□ -1.64
UBQLN4-202ENST00000459954 DOPEY2Q9Y3R5 2298 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 TMEM189A5PLL7 270 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 RBAKDNA6NC62 111 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 ODF3BA8MYP8 253 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 GNG7O60262 68 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 CNIH1O95406 144 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 PPBPP02775 128 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 ARMS2P0C7Q2 107 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 PRTN3P24158 256 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 CDKN1BP46527 198 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 CRIP1P50238 77 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 C21orf62-AS1Q17RA5 79 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 C5orf64Q2M2E5 130 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 MINOS1Q5TGZ0 78 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 FAM104BQ5XKR9 115 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 UNQ5815/PRO19632Q6UWF5 114 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 ORMDL3Q8N138 153 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 EXOC3-AS1Q8N2X6 119 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 OR9G4Q8NGQ1 327 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 PRSS3P2Q8NHM4 247 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 SGK494Q96LW2 274 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 ATP6V0BQ99437 205 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 CNFNQ9BYD5 112 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 MINOS1-NBL1R4GNA1 71 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 HECTD1Q9ULT8 2610 aa4.81□□□□□ -1.64
UBQLN4-202ENST00000459954 ROS1P08922 2347 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 DCHS2Q6V1P9 2916 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 A0A087X0K7 114 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 TRAV8-1A0A0A6YYK1 113 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 TAX1BP3O14907 124 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 TIMM23O14925 209 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 NUDT3O95989 172 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 IL4P05112 153 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 GPR183P32249 361 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 PAX8Q06710 450 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 ODF1Q14990 250 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 ZNF672Q499Z4 452 aaPredicted RBP4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 MPV17L2Q567V2 206 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 LINC00173Q6ZV60 143 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 Q8N6K4 173 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 TIMD4Q96H15 378 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 FANCD2OSQ96PS1 177 aa4.8□□□□□ -1.64
UBQLN4-202ENST00000459954 ITPR2Q14571 2701 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 IGHV3-21A0A0B4J1V1 117 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 hDV102S1A0JD36 115 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 FAM90A27PA6NNH2 459 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 HBDP02042 147 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 IGLC6P0CF74 106 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 ARF6P62330 175 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 ASPHD1Q5U4P2 390 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 LYZL1Q6UWQ5 148 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 OR4C5Q8NGB2 326 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 OR4X2Q8NGF9 303 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 PRELID3AQ96N28 172 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 PRR25Q96S07 402 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms