RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 IGKV1D-33P01593 117 aa7.93□□□□□ -1.14
UFD1-205ENST00000459854 IGKV1-33P01594 117 aa7.93□□□□□ -1.14
UFD1-205ENST00000459854 APOBEC3AP31941 199 aaPredicted RBP7.93□□□□□ -1.14
UFD1-205ENST00000459854 RPL15P61313 204 aaKnown RBP7.93□□□□□ -1.14
UFD1-205ENST00000459854 DTX2Q86UW9 622 aa7.93□□□□□ -1.14
UFD1-205ENST00000459854 HLA-DRB4P13762 266 aa7.93□□□□□ -1.14
UFD1-205ENST00000459854 RPL32P62910 135 aaKnown RBP7.93□□□□□ -1.14
UFD1-205ENST00000459854 C12orf74Q32Q52 190 aa7.93□□□□□ -1.14
UFD1-205ENST00000459854 MBNL3Q9NUK0 354 aaKnown RBP7.93□□□□□ -1.14
UFD1-205ENST00000459854 RPUSD1Q9UJJ7 312 aaKnown RBP7.93□□□□□ -1.14
UFD1-205ENST00000459854 HLA-DRB4X5D2U9 266 aa7.93□□□□□ -1.14
UFD1-205ENST00000459854 GNLYP22749 145 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 SRSF2Q01130 221 aaKnown RBP7.92□□□□□ -1.14
UFD1-205ENST00000459854 FOXF2Q12947 444 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 TCTEX1D4Q5JR98 221 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 IGKV1-12A0A0C4DH73 117 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 PAX4O43316 350 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 IGKV1D-12P01611 117 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 SLC25A16P16260 332 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 LINC01587Q99440 93 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 CECR9P0C854 216 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 CEACAM8P31997 349 aaPredicted RBP7.92□□□□□ -1.14
UFD1-205ENST00000459854 SMIM20Q8N5G0 67 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 RNF138Q8WVD3 245 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 CACNA1GO43497 2377 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 ETV2O00321 342 aaPredicted RBP7.92□□□□□ -1.14
UFD1-205ENST00000459854 B3GALT5-AS1P59052 145 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 SIGLEC15Q6ZMC9 328 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 GLMPQ8WWB7 406 aa7.92□□□□□ -1.14
UFD1-205ENST00000459854 IGHV3OR16-12A0A075B7B8 117 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 FGF6P10767 208 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 PRR30Q53SZ7 412 aaPredicted RBP7.91□□□□□ -1.14
UFD1-205ENST00000459854 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 F8VRH5 84 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 SYNJ2BPP57105 145 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 CLEC19AQ6UXS0 136 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
UFD1-205ENST00000459854 GGNQ86UU5 652 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 H3BMG7 143 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 COX6B1P14854 86 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 C9orf106Q8NAJ2 232 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 CEP295Q9C0D2 2601 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 PMS2P5A8MQ11 134 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 G3V4G9 280 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 J3QKU1 62 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 C1orf122Q6ZSJ8 110 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 IL17RELQ6ZVW7 336 aa7.91□□□□□ -1.14
UFD1-205ENST00000459854 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 FOXL2NBQ6ZUU3 175 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 SCRT1Q9BWW7 348 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 MBD3L4A6NDZ8 208 aaPredicted RBP7.9□□□□□ -1.14
UFD1-205ENST00000459854 MBD3L3A6NE82 208 aaPredicted RBP7.9□□□□□ -1.14
UFD1-205ENST00000459854 MBD3L5A6NJ08 208 aaPredicted RBP7.9□□□□□ -1.14
UFD1-205ENST00000459854 CRYBA4P53673 196 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 FOXI2Q6ZQN5 318 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 FAM216BQ8N7L0 139 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 MBD3L2Q8NHZ7 208 aaPredicted RBP7.9□□□□□ -1.14
UFD1-205ENST00000459854 TMEM14CQ9P0S9 112 aa7.9□□□□□ -1.14
UFD1-205ENST00000459854 RPL36AP83881 106 aaKnown RBP7.9□□□□□ -1.15
UFD1-205ENST00000459854 ZNF876PQ49A33 203 aa7.9□□□□□ -1.15
UFD1-205ENST00000459854 CENPVQ7Z7K6 275 aaPredicted RBP7.9□□□□□ -1.15
UFD1-205ENST00000459854 RPL36ALQ969Q0 106 aaKnown RBP7.9□□□□□ -1.15
UFD1-205ENST00000459854 SHANK2-AS3Q9BTD1 123 aa7.9□□□□□ -1.15
UFD1-205ENST00000459854 NUP210LQ5VU65 1888 aa7.9□□□□□ -1.15
UFD1-205ENST00000459854 H3BQ85 93 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 ZCCHC24Q8N2G6 241 aaKnown RBP7.89□□□□□ -1.15
UFD1-205ENST00000459854 RNASE8Q8TDE3 154 aaKnown RBP7.89□□□□□ -1.15
UFD1-205ENST00000459854 CARD19Q96LW7 228 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 C1orf43Q9BWL3 253 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 SRRM5B3KS81 715 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 C8orf86Q6ZUL3 223 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 TEN1Q86WV5 123 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 MRAPQ8TCY5 172 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 RNASE6Q93091 150 aaKnown RBP7.89□□□□□ -1.15
UFD1-205ENST00000459854 C20orf78Q9BR46 151 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 C17orf100A8MU93 164 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 EFNA2O43921 213 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 ARMS2P0C7Q2 107 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 LSM4Q9Y4Z0 139 aaKnown RBP7.89□□□□□ -1.15
UFD1-205ENST00000459854 COL6A6A6NMZ7 2263 aa7.89□□□□□ -1.15
UFD1-205ENST00000459854 TRGV2A0A075B6R0 118 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 F8WEM9 126 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 RNASE2P10153 161 aaKnown RBP7.88□□□□□ -1.15
UFD1-205ENST00000459854 IL15RAQ13261 267 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 C2orf66Q6UXQ4 117 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 PRIMA1Q86XR5 153 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 EXOC3-AS1Q8N2X6 119 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 IGKV2-40A0A087WW87 121 aaPredicted RBP7.88□□□□□ -1.15
UFD1-205ENST00000459854 A0A087WX48 190 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 TRBV7-1A0A0A6YYK4 115 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 TEX48A0A1B0GUV7 120 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 NDUFB8O95169 186 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 IGKV2D-40P01614 121 aaPredicted RBP7.88□□□□□ -1.15
UFD1-205ENST00000459854 PAX8Q06710 450 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 DCTN5Q9BTE1 182 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 RBM3P98179 157 aaKnown RBP7.88□□□□□ -1.15
UFD1-205ENST00000459854 ERCC8Q13216 396 aa7.88□□□□□ -1.15
UFD1-205ENST00000459854 PNRC2Q9NPJ4 139 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms