RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 Q6AWC8 147 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 ZNF493Q6ZR52 646 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 ERASQ7Z444 233 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 RPRMLQ8N4K4 120 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 OR10AG1Q8NH19 301 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 ZNF418Q8TF45 676 aaPredicted RBP6.73□□□□□ -1.33
VPS50-208ENST00000458707 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 F11RQ9Y624 299 aaKnown RBP6.73□□□□□ -1.33
VPS50-208ENST00000458707 LOC400499M0QZD8 3231 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 SPTBN2O15020 2390 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 TRAV8-6A0A0B4J262 113 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 H3BTX0 84 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 NDUFB3O43676 98 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 ARMS2P0C7Q2 107 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 FGF6P10767 208 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 LOXP28300 417 aaPredicted RBP6.73□□□□□ -1.33
VPS50-208ENST00000458707 TMEM155Q4W5P6 130 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 TM4SF20Q53R12 229 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 LCNL1Q6ZST4 164 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 PRNTQ86SH4 94 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 BPIFA4PQ86YQ2 179 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 LYPD1Q8N2G4 141 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 EXOC3-AS1Q8N2X6 119 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 OR5A1Q8NGJ0 315 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 KAAG1Q9UBP8 84 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 A0A096LNJ9 63 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 TMEM213A2RRL7 107 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 TEX22C9J3V5 150 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 FTH1P19P0C7X4 201 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 IGHV1-8P0DP01 117 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 TMEM97Q5BJF2 176 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 Q71RC1 249 aaPredicted RBP6.72□□□□□ -1.33
VPS50-208ENST00000458707 SRSF12Q8WXF0 261 aaKnown RBP6.72□□□□□ -1.33
VPS50-208ENST00000458707 MCRIP2Q9BUT9 160 aaKnown RBP6.72□□□□□ -1.33
VPS50-208ENST00000458707 NPFFR1Q9GZQ6 430 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 CTSZQ9UBR2 303 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 SIGLEC9Q9Y336 463 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 UFC1Q9Y3C8 167 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 U3KQK5 164 aa6.72□□□□□ -1.33
VPS50-208ENST00000458707 TRBV19A0A075B6N1 114 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 C7orf71A4D174 169 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 I3L2K1 104 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 NCR2O95944 276 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 CSN3P07498 182 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 LYZP61626 148 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 FAM27E3Q08E93 113 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 IGFL3Q6UXB1 125 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 LYPD2Q6UXB3 125 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 TMEM133Q9H2Q1 129 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 ABCA1O95477 2261 aa6.71□□□□□ -1.34
VPS50-208ENST00000458707 H3BRN7 92 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 K7EM74 188 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 K7EP34 96 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 SNAI2O43623 268 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 ENSAO43768 121 aaKnown RBP6.7□□□□□ -1.34
VPS50-208ENST00000458707 CNTFRP26992 372 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 CRIP1P50238 77 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 FOXE3Q13461 319 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 SIGLEC15Q6ZMC9 328 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 PPP1R27Q86WC6 154 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 PRSS3P2Q8NHM4 247 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 PTH2Q96A98 100 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 SRSF8Q9BRL6 282 aaKnown RBP6.7□□□□□ -1.34
VPS50-208ENST00000458707 SHANK2-AS3Q9BTD1 123 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 SCNM1Q9BWG6 230 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 IGHV3-21A0A0B4J1V1 117 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 SPAARA0A1B0GVQ0 90 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 H3BRM9 83 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 J3QR89 54 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 MRPS12O15235 138 aaKnown RBP6.7□□□□□ -1.34
VPS50-208ENST00000458707 IGKV1-17P01599 117 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 IGLV1-47P01700 117 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 PAX8Q06710 450 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 SMIM20Q8N5G0 67 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 RASL11BQ9BPW5 248 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 THYN1Q9P016 225 aa6.7□□□□□ -1.34
VPS50-208ENST00000458707 IGHV3-72A0A0B4J1Y9 119 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 CNIH1O95406 144 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 THBDP07204 575 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
VPS50-208ENST00000458707 DEFB109BQ30KR1 87 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 COX8CQ7Z4L0 72 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 OR9G4Q8NGQ1 327 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
VPS50-208ENST00000458707 USP9XQ93008 2570 aaPredicted RBP6.69□□□□□ -1.34
VPS50-208ENST00000458707 IGHV1-3A0A0C4DH29 117 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 A6NDN8 102 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 F8WDY8 70 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
VPS50-208ENST00000458707 ZNF207O43670 478 aaKnown RBP6.68□□□□□ -1.34
VPS50-208ENST00000458707 FAM106CPP0CH98 169 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 APELAP0DMC3 54 aa6.68□□□□□ -1.34
VPS50-208ENST00000458707 GATA3P23771 443 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms