RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 FOXI2Q6ZQN5 318 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 RPUSD4Q96CM3 377 aaKnown RBP12.45□□□□□ -0.42
TRIM39-211ENST00000458516 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
TRIM39-211ENST00000458516 PRELID1Q9Y255 219 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
TRIM39-211ENST00000458516 A0A0J9YX75 114 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 PGPA6NDG6 321 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 A8MZ25 164 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 PRAC2D3DTV9 90 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 UBE2G2P60604 165 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 DEFA6Q01524 100 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 IFITM2Q01629 132 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
TRIM39-211ENST00000458516 FAM74A7A6NL05 159 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 GGTLC3B5MD39 225 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 TEX46H3BTG2 121 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 LYPD6BQ8NI32 183 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
TRIM39-211ENST00000458516 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
TRIM39-211ENST00000458516 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
TRIM39-211ENST00000458516 H3BMM0 161 aa12.42□□□□□ -0.42
TRIM39-211ENST00000458516 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
TRIM39-211ENST00000458516 ZNF705DP0CH99 300 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-211ENST00000458516 ZNF705BP0CI00 300 aaPredicted RBP12.42□□□□□ -0.42
TRIM39-211ENST00000458516 TRPT1Q86TN4 253 aaKnown RBP12.42□□□□□ -0.42
TRIM39-211ENST00000458516 OR8A1Q8NGG7 326 aa12.42□□□□□ -0.42
TRIM39-211ENST00000458516 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
TRIM39-211ENST00000458516 TUBA4BQ9H853 241 aa12.42□□□□□ -0.42
TRIM39-211ENST00000458516 A8MTW9 85 aa12.41□□□□□ -0.42
TRIM39-211ENST00000458516 PAGE4O60829 102 aa12.41□□□□□ -0.42
TRIM39-211ENST00000458516 PPT1P50897 306 aa12.41□□□□□ -0.42
TRIM39-211ENST00000458516 EBLN2Q6P2I7 272 aa12.41□□□□□ -0.42
TRIM39-211ENST00000458516 LINC00322Q6ZN03 302 aaPredicted RBP12.41□□□□□ -0.42
TRIM39-211ENST00000458516 STHQ8IWL8 128 aa12.41□□□□□ -0.42
TRIM39-211ENST00000458516 PCNPQ8WW12 178 aaKnown RBP12.41□□□□□ -0.42
TRIM39-211ENST00000458516 SLC25A5P05141 298 aaKnown RBP12.4□□□□□ -0.42
TRIM39-211ENST00000458516 FRMD6-AS1P0C7T7 363 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 ATP5G3P48201 142 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 SUMO1P63165 101 aaKnown RBP12.4□□□□□ -0.42
TRIM39-211ENST00000458516 GNG5P63218 68 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 HIST1H1AQ02539 215 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-211ENST00000458516 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 RXFP4Q8TDU9 374 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 MANBALQ9NQG1 85 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 GNG13Q9P2W3 67 aa12.4□□□□□ -0.42
TRIM39-211ENST00000458516 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-211ENST00000458516 LOC102724200A0A096LPH7 203 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-211ENST00000458516 DIRC3C9JPN6 131 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-211ENST00000458516 NMBP08949 121 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 RPL35AP18077 110 aaKnown RBP12.39□□□□□ -0.43
TRIM39-211ENST00000458516 CSN1S1P47710 185 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 CNN1P51911 297 aaKnown RBP12.39□□□□□ -0.43
TRIM39-211ENST00000458516 PMS2P11Q13670 270 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 ARL6IP6Q8N6S5 226 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 NKX6-2Q9C056 277 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-211ENST00000458516 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
TRIM39-211ENST00000458516 NPIPB6E9PJ23 425 aa12.38□□□□□ -0.43
TRIM39-211ENST00000458516 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
TRIM39-211ENST00000458516 CST9LP1Q5W188 147 aa12.38□□□□□ -0.43
TRIM39-211ENST00000458516 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
TRIM39-211ENST00000458516 CCDC28AQ8IWP9 274 aa12.38□□□□□ -0.43
TRIM39-211ENST00000458516 OR4B1Q8NGF8 309 aa12.38□□□□□ -0.43
TRIM39-211ENST00000458516 OR10J6PQ8NGY7 276 aa12.38□□□□□ -0.43
TRIM39-211ENST00000458516 RBAKDNA6NC62 111 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 IFNA1P01562 189 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 IGKV3-20P01619 116 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 TCRAP04437 139 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 ERCC8Q13216 396 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 AMTNQ6UX39 209 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 VGLL1Q99990 258 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 EPDR1Q9UM22 224 aa12.37□□□□□ -0.43
TRIM39-211ENST00000458516 BCL2P10415 239 aa12.36□□□□□ -0.43
TRIM39-211ENST00000458516 C9orf47Q6ZRZ4 202 aa12.36□□□□□ -0.43
TRIM39-211ENST00000458516 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
TRIM39-211ENST00000458516 AGPAT4-IT1Q9H0P7 198 aa12.36□□□□□ -0.43
TRIM39-211ENST00000458516 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
TRIM39-211ENST00000458516 KIR2DL5BA0A0G2JN68 375 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 KIR2DL5BA0A0G2JPC4 375 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 LOC102723971A0A1B0GUV8 181 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 PEX7O00628 323 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 HAGHQ16775 308 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 ATG101Q9BSB4 218 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 SLC35B3Q9H1N7 401 aa12.35□□□□□ -0.43
TRIM39-211ENST00000458516 SERTM2A0A1B0GWG4 89 aa12.34□□□□□ -0.43
TRIM39-211ENST00000458516 GIG44P09565 113 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-211ENST00000458516 CT45A10P0DMU9 189 aa12.34□□□□□ -0.43
TRIM39-211ENST00000458516 APOC4P55056 127 aa12.34□□□□□ -0.43
TRIM39-211ENST00000458516 MORN3Q6PF18 240 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-211ENST00000458516 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms