RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 K7EIL1 84 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 PPT1P50897 306 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 PMS2P11Q13670 270 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 ICAM4Q14773 271 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 APRG1Q8IVJ8 170 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 IQCF2Q8IXL9 164 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 DEFB125Q8N687 156 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 ARL6IP6Q8N6S5 226 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 NKX6-2Q9C056 277 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-204ENST00000452182 WFDC10AQ9H1F0 79 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
SCN9A-204ENST00000452182 IGHV4-30-4P0DP06 118 aa8.57□□□□□ -1.04
SCN9A-204ENST00000452182 HLA-DMBP28068 263 aa8.57□□□□□ -1.04
SCN9A-204ENST00000452182 ZNF738Q8NE65 137 aa8.57□□□□□ -1.04
SCN9A-204ENST00000452182 RXFP4Q8TDU9 374 aa8.57□□□□□ -1.04
SCN9A-204ENST00000452182 RPUSD4Q96CM3 377 aaKnown RBP8.57□□□□□ -1.04
SCN9A-204ENST00000452182 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
SCN9A-204ENST00000452182 SAV1Q9H4B6 383 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-204ENST00000452182 FAM74A7A6NL05 159 aa8.56□□□□□ -1.04
SCN9A-204ENST00000452182 PRB2P02812 416 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-204ENST00000452182 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
SCN9A-204ENST00000452182 ZNF124Q15973 351 aa8.56□□□□□ -1.04
SCN9A-204ENST00000452182 EBLN2Q6P2I7 272 aa8.56□□□□□ -1.04
SCN9A-204ENST00000452182 CLUHP3Q96NS8 147 aa8.56□□□□□ -1.04
SCN9A-204ENST00000452182 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
SCN9A-204ENST00000452182 A0A0J9YX75 114 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 PGPA6NDG6 321 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 ZNF705FA8MVS1 300 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-204ENST00000452182 H3BMM0 161 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 M0R3E3 92 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 CSN1S1P47710 185 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 CCL20P78556 96 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 ACTL10Q5JWF8 245 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 LINC00322Q6ZN03 302 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-204ENST00000452182 ZNF767PQ75MW2 155 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 OR8A1Q8NGG7 326 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 SRD5A3Q9H8P0 318 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 MANBALQ9NQG1 85 aa8.55□□□□□ -1.04
SCN9A-204ENST00000452182 YTHDF2Q9Y5A9 579 aaKnown RBP8.55□□□□□ -1.04
SCN9A-204ENST00000452182 A0A1B0GV50 99 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 KNCNA6PVL3 124 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 A8MTW9 85 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 GGTLC3B5MD39 225 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
SCN9A-204ENST00000452182 SUMO1P63165 101 aaKnown RBP8.54□□□□□ -1.04
SCN9A-204ENST00000452182 GDF5OSQ5U4N7 250 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 TRPT1Q86TN4 253 aaKnown RBP8.54□□□□□ -1.04
SCN9A-204ENST00000452182 STHQ8IWL8 128 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 C5orf17Q8NAS9 161 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 CMTM2Q8TAZ6 248 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 TCEAL7Q9BRU2 100 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 TUBA4BQ9H853 241 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 MEGF8Q7Z7M0 2845 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 RBAKDNA6NC62 111 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 PRAC2D3DTV9 90 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 F6UB75 175 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 PAGE4O60829 102 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
SCN9A-204ENST00000452182 TAGLN2P37802 199 aaKnown RBP8.54□□□□□ -1.04
SCN9A-204ENST00000452182 DEFB1P60022 68 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 UBE2G2P60604 165 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 DEFA6Q01524 100 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 IFITM2Q01629 132 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 CCDC28AQ8IWP9 274 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
SCN9A-204ENST00000452182 LOC102724200A0A096LPH7 203 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-204ENST00000452182 KIR2DL5BA0A0G2JN68 375 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 KIR2DL5BA0A0G2JPC4 375 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 SERTM2A0A1B0GWG4 89 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 RBMY1BA6NDE4 496 aaKnown RBP8.53□□□□□ -1.04
SCN9A-204ENST00000452182 RBMY1EA6NEQ0 496 aaKnown RBP8.53□□□□□ -1.04
SCN9A-204ENST00000452182 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 IFNA1P01562 189 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 NMBP08949 121 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 RBMY1DP0C7P1 496 aaKnown RBP8.53□□□□□ -1.04
SCN9A-204ENST00000452182 CNN1P51911 297 aaKnown RBP8.53□□□□□ -1.04
SCN9A-204ENST00000452182 KIR2DL5AQ8N109 375 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 OR10J6PQ8NGY7 276 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 KIR2DL5BQ8NHK3 375 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 GNG13Q9P2W3 67 aa8.53□□□□□ -1.04
SCN9A-204ENST00000452182 AGRNO00468 2067 aa8.52□□□□□ -1.04
SCN9A-204ENST00000452182 NPIPB6E9PJ23 425 aa8.52□□□□□ -1.05
SCN9A-204ENST00000452182 TCRAP04437 139 aa8.52□□□□□ -1.05
SCN9A-204ENST00000452182 FRMD6-AS1P0C7T7 363 aa8.52□□□□□ -1.05
SCN9A-204ENST00000452182 C9orf47Q6ZRZ4 202 aa8.52□□□□□ -1.05
SCN9A-204ENST00000452182 MRAPQ8TCY5 172 aa8.52□□□□□ -1.05
SCN9A-204ENST00000452182 EPDR1Q9UM22 224 aa8.52□□□□□ -1.05
SCN9A-204ENST00000452182 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 ZNF705DP0CH99 300 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-204ENST00000452182 ZNF705BP0CI00 300 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-204ENST00000452182 BCL2P10415 239 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 RAB14P61106 215 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 NUTF2P61970 127 aaKnown RBP8.51□□□□□ -1.05
SCN9A-204ENST00000452182 HIST1H1AQ02539 215 aaPredicted RBP8.51□□□□□ -1.05
SCN9A-204ENST00000452182 DEFB121Q5J5C9 76 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 CST9LP1Q5W188 147 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 MORN3Q6PF18 240 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms