RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PRTN3P24158 256 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 NDPQ00604 133 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 SPRNQ5BIV9 151 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 MINOS1Q5TGZ0 78 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 IGFBPL1Q8WX77 278 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 PGPEP1Q9NXJ5 209 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 ZNF256Q9Y2P7 627 aaPredicted RBP5.76□□□□□ -1.49
BEST1-202ENST00000449131 MINOS1-NBL1R4GNA1 71 aa5.76□□□□□ -1.49
BEST1-202ENST00000449131 WDFY3Q8IZQ1 3526 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 A0A1W2PNU3 283 aaPredicted RBP5.75□□□□□ -1.49
BEST1-202ENST00000449131 OOSP1A8MZH6 123 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 CD7P09564 240 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 AMMECR1LQ6DCA0 310 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 CRIP3Q6Q6R5 217 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 SMIM12Q96EX1 92 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 RCHY1Q96PM5 261 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 NXT2Q9NPJ8 142 aaKnown RBP5.75□□□□□ -1.49
BEST1-202ENST00000449131 K7EM74 188 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 M0R1W7 72 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 SNCGO76070 127 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 RIPPLY3P57055 190 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 PSG3Q16557 428 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 TEX36Q5VZQ5 186 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 H3BUT2 72 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 PPP1R17O96001 155 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 TYMSP04818 313 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 PIP4P1Q86T03 277 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 MTURNQ8N3F0 131 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 C5orf30Q96GV9 206 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 NPFFR1Q9GZQ6 430 aa5.75□□□□□ -1.49
BEST1-202ENST00000449131 SPTBN4Q9H254 2564 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 CRXO43186 299 aaPredicted RBP5.74□□□□□ -1.49
BEST1-202ENST00000449131 SH2D1AO60880 128 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 RRN3P1Q2M238 152 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 SIGLEC15Q6ZMC9 328 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 Q86TA4 180 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 JKAMPQ9P055 326 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 MRPL27Q9P0M9 148 aaKnown RBP5.74□□□□□ -1.49
BEST1-202ENST00000449131 CCDC168Q8NDH2 2452 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 ATG2AQ2TAZ0 1938 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 TDGF1P13385 188 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 Q0VG73 95 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 SHANK2-AS3Q9BTD1 123 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 SLC25A2Q9BXI2 301 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 BPESC1Q9GZL8 116 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 ST20Q9HBF5 79 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 MOB4Q9Y3A3 225 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 V9GYV3 84 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 K7ENP7 123 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 ARMS2P0C7Q2 107 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PAX1P15863 534 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 SLAQ13239 276 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 AMN1Q8IY45 258 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 C18orf32Q8TCD1 76 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 RNASE8Q8TDE3 154 aaKnown RBP5.74□□□□□ -1.49
BEST1-202ENST00000449131 GEMIN7Q9H840 131 aaKnown RBP5.74□□□□□ -1.49
BEST1-202ENST00000449131 DKK4Q9UBT3 224 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 H3BUX3 64 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 GNLYP22749 145 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PRR20EP86478 221 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PRR20CP86479 221 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PRR20DP86480 221 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PRR20BP86481 221 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PRR20AP86496 221 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 C19orf54Q5BKX5 351 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 ZNF562Q6V9R5 426 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 LYPD1Q8N2G4 141 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 ITLN2Q8WWU7 325 aaPredicted RBP5.74□□□□□ -1.49
BEST1-202ENST00000449131 SPRY4Q9C004 299 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 SPCS1Q9Y6A9 102 aa5.74□□□□□ -1.49
BEST1-202ENST00000449131 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 PSMB11A5LHX3 300 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 NPFFO15130 113 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 APOMO95445 188 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 SAA4P35542 130 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 YPEL3P61236 119 aaPredicted RBP5.73□□□□□ -1.49
BEST1-202ENST00000449131 SRSF1Q07955 248 aaKnown RBP eCLIP5.73□□□□□ -1.49
BEST1-202ENST00000449131 POU2AF1Q16633 256 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 LINC00311Q8N616 119 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 DUX3Q96PT4 197 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 BEX4Q9NWD9 120 aaPredicted RBP5.73□□□□□ -1.49
BEST1-202ENST00000449131 ABCA2Q9BZC7 2435 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 K7EN84 100 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 DPM2O94777 84 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 NDUFB8O95169 186 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 COX6CP09669 75 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 ODF3L1Q8IXM7 274 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 NHP2Q9NX24 153 aaKnown RBP5.73□□□□□ -1.49
BEST1-202ENST00000449131 TMEM131Q92545 1883 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 GAGE1Q13065 139 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 STPG4Q8N801 248 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 JMJD8Q96S16 334 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 MEGF9Q9H1U4 602 aa5.73□□□□□ -1.49
BEST1-202ENST00000449131 MRPL16Q9NX20 251 aaKnown RBP5.73□□□□□ -1.49
BEST1-202ENST00000449131 H7C1H1 209 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms