RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SLAQ13239 276 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 FAM231DQ6ZW35 169 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 A0A087WWL8 130 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 TRAV13-1A0A0B4J241 112 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 MBD3L4A6NDZ8 208 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-204ENST00000448183 MBD3L3A6NE82 208 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-204ENST00000448183 MBD3L5A6NJ08 208 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-204ENST00000448183 CD59P13987 128 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 MBD3L2Q8NHZ7 208 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-204ENST00000448183 NPSP0C0P6 89 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 LMO1P25800 156 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 ZNF726P1Q15940 193 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 C11orf44Q8N8P7 122 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 VGLL1Q99990 258 aa6.29□□□□□ -1.4
NEDD9-204ENST00000448183 FAM223BA6NKX1 122 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 MMP23AO75900 390 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 FAM223AQ8IWN6 122 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 V9GYV3 84 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 VWC2LB2RUY7 222 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 IGLL1P15814 213 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 Q8N8P6 123 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-204ENST00000448183 MED13LQ71F56 2210 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 ZNF407Q9C0G0 2248 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 TRPT1Q86TN4 253 aaKnown RBP6.28□□□□□ -1.4
NEDD9-204ENST00000448183 PPDPFLQ8WWR9 84 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 PCNX1Q96RV3 2341 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 SCN5AQ14524 2016 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 COX8AP10176 69 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 DSCR9P59020 149 aa6.28□□□□□ -1.4
NEDD9-204ENST00000448183 K7EP13 123 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 NDUFB8O95169 186 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 INSP01308 110 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 IGHV3-53P01767 116 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 IGHG3P01860 377 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 INAFM2P0DMQ5 153 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 LGALS9BQ3B8N2 356 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 LGALS9CQ6DKI2 356 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 LYPD2Q6UXB3 125 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 DAZ1Q9NQZ3 744 aaKnown RBP6.27□□□□□ -1.41
NEDD9-204ENST00000448183 NDUFA4L2Q9NRX3 87 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 TP53TG1Q9Y2A0 90 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 TRBV19A0A075B6N1 114 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 E9PQ18 207 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 H3BMM0 161 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 SLC25A16P16260 332 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 GAGE1Q13065 139 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 PIP4P2Q8N4L2 257 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 TSSC4Q9Y5U2 329 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-204ENST00000448183 ETV2O00321 342 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-204ENST00000448183 SAP30O75446 220 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 BRD3OSQ6XYD6 125 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 PTPRDP23468 1912 aa6.27□□□□□ -1.41
NEDD9-204ENST00000448183 B4DSR2 109 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 F8W1H4 67 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-204ENST00000448183 IGKV1-39P01597 117 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 IGKV1D-39P04432 117 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 C9orf153Q5TBE3 101 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 C1QTNF4Q9BXJ3 329 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 K7EP34 96 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 OVOL3O00110 214 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 PMVKQ15126 192 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 C11orf52Q96A22 123 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 SMIM27A0A1W2PRY6 76 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 RHODO00212 210 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 ZSWIM8A7E2V4 1837 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 A0A0G2JNJ9 132 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 MRPL51Q4U2R6 128 aaKnown RBP6.26□□□□□ -1.41
NEDD9-204ENST00000448183 ZNF114Q8NC26 417 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 NCOR1P1Q9H4R4 102 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 Q9UFV3 132 aa6.26□□□□□ -1.41
NEDD9-204ENST00000448183 INS-IGF2F8WCM5 200 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 RSPO3Q9BXY4 272 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-204ENST00000448183 YLPM1P49750 1951 aaKnown RBP6.25□□□□□ -1.41
NEDD9-204ENST00000448183 BVES-AS1Q5T3Y7 98 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 IL17RELQ6ZVW7 336 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 C8orf49Q96NF6 230 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 THADAQ6YHU6 1953 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 COL8A2P25067 703 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 SS18Q15532 418 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 PRSS57Q6UWY2 283 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 ZNRD1Q9P1U0 126 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 ANK1P16157 1881 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 SOCS3O14543 225 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 SAA4P35542 130 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 TCF15Q12870 199 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 NSUN5P1Q3KNT7 163 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 FAM110DQ8TAY7 271 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-204ENST00000448183 UBE2E2Q96LR5 201 aa6.25□□□□□ -1.41
NEDD9-204ENST00000448183 PRR25Q96S07 402 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms