RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PRG4Q92954 1404 aaPredicted RBP2.04□□□□□ -2.08
PMS1-216ENST00000447734 GGACTQ9BVM4 153 aa2.04□□□□□ -2.08
PMS1-216ENST00000447734 TIMM21Q9BVV7 248 aa2.04□□□□□ -2.08
PMS1-216ENST00000447734 CST9LQ9H4G1 147 aa2.04□□□□□ -2.08
PMS1-216ENST00000447734 CCDC88CQ9P219 2028 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 SHROOM3Q8TF72 1996 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 SYNJ1O43426 1573 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 NISCHQ9Y2I1 1504 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 FAM236AA0A1B0GUQ0 79 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 FAM236BA0A1B0GV22 79 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 LOC107986453A0A1B0GWG9 222 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 ZNF670-ZNF695F2Z2N8 137 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 IFNGP01579 166 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 TRACP01848 142 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 SLC25A4P12235 298 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 CIRBPQ14011 172 aaKnown RBP2.03□□□□□ -2.08
PMS1-216ENST00000447734 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 LINC00304Q8N9R0 145 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 CCL4L1Q8NHW4 92 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 RAB37Q96AX2 223 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 GNG8Q9UK08 70 aa2.03□□□□□ -2.08
PMS1-216ENST00000447734 ZFC3H1O60293 1989 aaKnown RBP2.03□□□□□ -2.08
PMS1-216ENST00000447734 FRMPD1Q5SYB0 1578 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 SMG6Q86US8 1419 aaKnown RBP2.02□□□□□ -2.09
PMS1-216ENST00000447734 TANC2Q9HCD6 1990 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 ZNF737O75373 536 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 IGF2P01344 180 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 ZNF25P17030 456 aaPredicted RBP2.02□□□□□ -2.09
PMS1-216ENST00000447734 ZNF93P35789 620 aaPredicted RBP2.02□□□□□ -2.09
PMS1-216ENST00000447734 GUCA1AP43080 201 aaPredicted RBP2.02□□□□□ -2.09
PMS1-216ENST00000447734 PCBD1P61457 104 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 IGFL3Q6UXB1 125 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 LINC00311Q8N616 119 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 MUCL1Q96DR8 90 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 DNAJC15Q9Y5T4 150 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 POLEQ07864 2286 aa2.02□□□□□ -2.09
PMS1-216ENST00000447734 KDM6AO15550 1401 aaPredicted RBP2.01□□□□□ -2.09
PMS1-216ENST00000447734 TNS3Q68CZ2 1445 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 DSCR4P56555 118 aaPredicted RBP2.01□□□□□ -2.09
PMS1-216ENST00000447734 ELOBQ15370 118 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 DEFB113Q30KQ7 82 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 CLLU1Q5K131 121 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 GLIPR1L1Q6UWM5 242 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 IZUMO2Q6UXV1 221 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 RPS19BP1Q86WX3 136 aaKnown RBP2.01□□□□□ -2.09
PMS1-216ENST00000447734 C10orf111Q8N326 155 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 OR5AK2Q8NH90 309 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 SFT2D1Q8WV19 159 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 NABP2Q9BQ15 211 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 NAA38Q9BRA0 125 aaKnown RBP2.01□□□□□ -2.09
PMS1-216ENST00000447734 TMEM191AQ9H0A3 160 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 CST11Q9H112 138 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 METTL1Q9UBP6 276 aaKnown RBP2.01□□□□□ -2.09
PMS1-216ENST00000447734 CUL9Q8IWT3 2517 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 ZSWIM8A7E2V4 1837 aa2.01□□□□□ -2.09
PMS1-216ENST00000447734 RTEL1-TNFRSF6BF6WH68 1400 aa2□□□□□ -2.09
PMS1-216ENST00000447734 SMARCA4P51532 1647 aa2□□□□□ -2.09
PMS1-216ENST00000447734 IGKV3D-11A0A0A0MRZ8 115 aa2□□□□□ -2.09
PMS1-216ENST00000447734 TRAV12-1A0A0B4J245 112 aa2□□□□□ -2.09
PMS1-216ENST00000447734 TCRBV4S1A1TA0A5B7 111 aa2□□□□□ -2.09
PMS1-216ENST00000447734 E7EUB6 86 aa2□□□□□ -2.09
PMS1-216ENST00000447734 ATP6V1G2-DDX39BF2Z307 99 aa2□□□□□ -2.09
PMS1-216ENST00000447734 CDC42EP2O14613 210 aa2□□□□□ -2.09
PMS1-216ENST00000447734 IGKV1-17P01599 117 aa2□□□□□ -2.09
PMS1-216ENST00000447734 CD14P08571 375 aa2□□□□□ -2.09
PMS1-216ENST00000447734 P0C880 135 aa2□□□□□ -2.09
PMS1-216ENST00000447734 CCL4P13236 92 aa2□□□□□ -2.09
PMS1-216ENST00000447734 AZU1P20160 251 aa2□□□□□ -2.09
PMS1-216ENST00000447734 CKS2P33552 79 aa2□□□□□ -2.09
PMS1-216ENST00000447734 ETV6P41212 452 aa2□□□□□ -2.09
PMS1-216ENST00000447734 PLGLB1Q02325 96 aa2□□□□□ -2.09
PMS1-216ENST00000447734 TPRXLQ17RH7 258 aa2□□□□□ -2.09
PMS1-216ENST00000447734 CLECL1Q8IZS7 167 aa2□□□□□ -2.09
PMS1-216ENST00000447734 C12orf57Q99622 126 aa2□□□□□ -2.09
PMS1-216ENST00000447734 SLC35B3Q9H1N7 401 aa2□□□□□ -2.09
PMS1-216ENST00000447734 SOX21Q9Y651 276 aaPredicted RBP2□□□□□ -2.09
PMS1-216ENST00000447734 COL1A1P02452 1464 aaPredicted RBP2□□□□□ -2.09
PMS1-216ENST00000447734 SPEF2Q9C093 1822 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 IGKV1D-17A0A075B6S4 117 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 TRAV10A0A0B4J240 114 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 A0A0G2JMM0 328 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 PNMA8CA0A1B0GUJ8 204 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 A0A1W2PPB8 328 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 KIR3DP1A8MWS1 328 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 C5orf67F2Z3F1 127 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 F6UZH7 168 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 H3BRN7 92 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 YPEL1O60688 119 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 RBP4P02753 201 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 CD3DP04234 171 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 Q1T7F1 81 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 C2orf82Q6UX34 121 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 ARPINQ7Z6K5 226 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 SDF2Q99470 211 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 CCDC167Q9P0B6 97 aa1.99□□□□□ -2.09
PMS1-216ENST00000447734 KDM5CP41229 1560 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 A0A087WSZ3 146 aa1.98□□□□□ -2.09
PMS1-216ENST00000447734 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms