RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 IGHV3OR16-10A0A075B7F0 116 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 TRAV1-2A0A0B4J238 106 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 A0A0J9YXV3 536 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 SMIM31A0A1B0GVY4 71 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 LEUTXA8MZ59 168 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 INMT-MINDY4F8WBC2 141 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 GEMIN2O14893 280 aaKnown RBP4.59□□□□□ -1.67
MCF2-206ENST00000446225 OR7C2O60412 319 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 MMP23AO75900 390 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 NDUFC2O95298 119 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 ATP5G1P05496 136 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 SPNP16150 400 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 SRP14P37108 136 aaKnown RBP4.59□□□□□ -1.67
MCF2-206ENST00000446225 NCS1P62166 190 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
MCF2-206ENST00000446225 GUCA2BQ16661 112 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 ZNF767PQ75MW2 155 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 Q8N7P7 452 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 OR51T1Q8NGJ9 327 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 CYYR1Q96J86 154 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 SMIM3Q9BZL3 60 aa4.59□□□□□ -1.67
MCF2-206ENST00000446225 SOX21Q9Y651 276 aaPredicted RBP4.59□□□□□ -1.67
MCF2-206ENST00000446225 TRAV8-6A0A0B4J262 113 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 A0A1B0GXF2 115 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 LINC00862A6NCI5 91 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 M0R2Z0 102 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 PDCD5O14737 125 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 OR2A4O95047 310 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 HBZP02008 142 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 FGF6P10767 208 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 PRTN3P24158 256 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 CNTFRP26992 372 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 EDDM3BP56851 147 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 RBM11P57052 281 aaKnown RBP4.58□□□□□ -1.68
MCF2-206ENST00000446225 QRFPP83859 136 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 PSG9Q00887 426 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 MEF2CQ06413 473 aaPredicted RBP4.58□□□□□ -1.68
MCF2-206ENST00000446225 NR2C2APQ86WQ0 139 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 HIST1H2BAQ96A08 127 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 OR2A7Q96R45 310 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 METTL26Q96S19 204 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 GNB1LQ9BYB4 327 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 TMEM222Q9H0R3 208 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 TNFSF18Q9UNG2 199 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 JMJD1CQ15652 2540 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 AIPO00170 330 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 CCL25O15444 150 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 CSN2P05814 226 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 CCL3L1P16619 93 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 SDC2P34741 201 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 PRSS3P35030 304 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 G6PCP35575 357 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 TGFBR1P36897 503 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 LSM3P62310 102 aaKnown RBP4.58□□□□□ -1.68
MCF2-206ENST00000446225 C11orf42Q8N5U0 333 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 DEFB125Q8N687 156 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 SUMF2Q8NBJ7 301 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 OR13C8Q8NGS7 320 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 ISOC1Q96CN7 298 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 OR2D2Q9H210 308 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 GNB4Q9HAV0 340 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 SCP2D1Q9UJQ7 156 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 MXRA5Q9NR99 2828 aa4.58□□□□□ -1.68
MCF2-206ENST00000446225 DOCK11Q5JSL3 2073 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 IFITM5A6NNB3 132 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 FABP5P3A8MUU1 101 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 TMEM14DPA8MWL7 114 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 C8orf87E5RJ46 101 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 IL34Q6ZMJ4 242 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 TCF23Q7RTU1 214 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 VMO1Q7Z5L0 202 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 SNX29P2Q8IUI4 249 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 Q8N377 158 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 GTSF1Q8WW33 167 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 MALSU1Q96EH3 234 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 MRPS24Q96EL2 167 aaKnown RBP4.57□□□□□ -1.68
MCF2-206ENST00000446225 TAF9BQ9HBM6 251 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 METTL1Q9UBP6 276 aaKnown RBP4.57□□□□□ -1.68
MCF2-206ENST00000446225 NAV3Q8IVL0 2385 aa4.57□□□□□ -1.68
MCF2-206ENST00000446225 TRAV26-2A0A0B4J265 109 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 IGHV1-69DA0A0B4J2H0 117 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 A0A0J9YXY3 114 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 DUXBA0A1W2PPF3 345 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 ODAMA1E959 279 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 C17orf98A8MV24 154 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 A8MWP6 167 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 M0R1W7 72 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 PDCD6O75340 191 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 SCO1O75880 301 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 ZNF728P0DKX0 622 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 KLRD1Q13241 179 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 MPV17LQ2QL34 196 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TIMM50Q3ZCQ8 353 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 HCP5Q6MZN7 132 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 BRD3OSQ6XYD6 125 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 LINC00596Q86U02 117 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 TEX29Q8N6K0 151 aa4.56□□□□□ -1.68
MCF2-206ENST00000446225 ZNF418Q8TF45 676 aaPredicted RBP4.56□□□□□ -1.68
MCF2-206ENST00000446225 PSMG3Q9BT73 122 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms