RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 GAGE12IP0CL82 117 aa10.74□□□□□ -0.69
SEC13-213ENST00000445064 VAMP2P63027 116 aa10.74□□□□□ -0.69
SEC13-213ENST00000445064 GNPNAT1Q96EK6 184 aaPredicted RBP10.74□□□□□ -0.69
SEC13-213ENST00000445064 SAT2Q96F10 170 aaPredicted RBP10.74□□□□□ -0.69
SEC13-213ENST00000445064 DNAJC4Q9NNZ3 241 aa10.74□□□□□ -0.69
SEC13-213ENST00000445064 DNAH11Q96DT5 4516 aa10.74□□□□□ -0.69
SEC13-213ENST00000445064 TRAV12-3A0A0B4J271 114 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 CT45A10P0DMU9 189 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 IGLC2P0DOY2 106 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 HOXA5P20719 270 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 CAMLGP49069 296 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 BCAP31P51572 246 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 MIC13Q5XKP0 118 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 Q6ZRG5 221 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 NRARPQ7Z6K4 114 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 LSM5Q9Y4Y9 91 aaKnown RBP10.73□□□□□ -0.69
SEC13-213ENST00000445064 PXMP4Q9Y6I8 212 aa10.73□□□□□ -0.69
SEC13-213ENST00000445064 ZNF701M0R085 212 aaPredicted RBP10.72□□□□□ -0.69
SEC13-213ENST00000445064 CST7O76096 145 aa10.72□□□□□ -0.69
SEC13-213ENST00000445064 IL7P13232 177 aa10.72□□□□□ -0.69
SEC13-213ENST00000445064 M6PRP20645 277 aa10.72□□□□□ -0.69
SEC13-213ENST00000445064 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
SEC13-213ENST00000445064 RXFP4Q8TDU9 374 aa10.72□□□□□ -0.69
SEC13-213ENST00000445064 ZNF431Q8TF32 576 aaPredicted RBP10.72□□□□□ -0.69
SEC13-213ENST00000445064 FAM24AA6NFZ4 105 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 FAM25EA8MYX2 175 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 SNURFLB1AK76 121 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 PLA2G10O15496 165 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 RLN2P04090 185 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 CAV2P51636 162 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 RAB31Q13636 194 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 ESRGQ1W209 222 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 CNPY1Q3B7I2 92 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 C20orf85Q9H1P6 137 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
SEC13-213ENST00000445064 NPIPB6E9PJ23 425 aa10.7□□□□□ -0.7
SEC13-213ENST00000445064 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
SEC13-213ENST00000445064 LEPP41159 167 aa10.7□□□□□ -0.7
SEC13-213ENST00000445064 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
SEC13-213ENST00000445064 KRTAP1-5Q9BYS1 174 aa10.7□□□□□ -0.7
SEC13-213ENST00000445064 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
SEC13-213ENST00000445064 TRAV6A0A075B6T7 132 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 C5orf51A6NDU8 294 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 ERCC8Q13216 396 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 GUK1Q16774 197 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 MAPKAPK5-AS1Q8N8E1 139 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 OR1L4Q8NGR5 311 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 SEC22CQ9BRL7 303 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 PYGO2Q9BRQ0 406 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 C11orf1Q9H5F2 150 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 UQCC1Q9NVA1 299 aa10.69□□□□□ -0.7
SEC13-213ENST00000445064 M0R3E3 92 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 TCRBP04435 133 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 Q6ZTI0 123 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 SPATA12Q7Z6I5 190 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 PFDN5Q99471 154 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 Q9H3A6 140 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 TMPRSS5Q9H3S3 457 aa10.68□□□□□ -0.7
SEC13-213ENST00000445064 RYR1P21817 5038 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 H3BNG1 76 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 LYRM1O43325 122 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 RPL29P47914 159 aaKnown RBP10.67□□□□□ -0.7
SEC13-213ENST00000445064 BAXQ07812 192 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 DAZ2Q13117 558 aaKnown RBP10.67□□□□□ -0.7
SEC13-213ENST00000445064 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 C2orf50Q96LR7 162 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 UPK3BQ9BT76 320 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 GSN-AS1Q9NRJ2 163 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
SEC13-213ENST00000445064 TRBV19A0A075B6N1 114 aa10.66□□□□□ -0.7
SEC13-213ENST00000445064 UBE2L5PA0A1B0GUS4 154 aa10.66□□□□□ -0.7
SEC13-213ENST00000445064 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
SEC13-213ENST00000445064 PVALBP20472 110 aaPredicted RBP10.66□□□□□ -0.7
SEC13-213ENST00000445064 CD300CQ08708 224 aa10.66□□□□□ -0.7
SEC13-213ENST00000445064 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
SEC13-213ENST00000445064 C12orf45Q8N5I9 185 aaPredicted RBP10.66□□□□□ -0.7
SEC13-213ENST00000445064 VSIG2Q96IQ7 327 aa10.66□□□□□ -0.7
SEC13-213ENST00000445064 MRPS16Q9Y3D3 137 aaKnown RBP10.66□□□□□ -0.7
SEC13-213ENST00000445064 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 A0A096LPF7 62 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 IGSF23A1L1A6 192 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 C7orf71A4D174 169 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 ZNF253O75346 499 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.7
SEC13-213ENST00000445064 NDUFB4O95168 129 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 S100A11P31949 105 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 SULT1A1P50225 295 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 S100A10P60903 97 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 BTN1A1Q13410 526 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 AGPAT4-IT1Q9H0P7 198 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 NUDT15Q9NV35 164 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 TIMM9Q9Y5J7 89 aa10.65□□□□□ -0.7
SEC13-213ENST00000445064 ABCA13Q86UQ4 5058 aa10.64□□□□□ -0.71
SEC13-213ENST00000445064 PYYP10082 97 aa10.64□□□□□ -0.71
SEC13-213ENST00000445064 HIST1H1EP10412 219 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms