RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MCRIP1C9JLW8 97 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 HYPMO75409 117 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 TRACP01848 142 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 CD3DP04234 171 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 SLC25A4P12235 298 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 FXYD2P54710 66 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 FOXA1P55317 472 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 SS18Q15532 418 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 FAM229BQ4G0N7 80 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 Q5W150 140 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 Q6P435 159 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 OR4X2Q8NGF9 303 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 AQP10Q96PS8 301 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 KLK12Q9UKR0 248 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 COL18A1P39060 1754 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 LRP4O75096 1905 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 CUL7Q14999 1698 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 CDC42BPBQ9Y5S2 1711 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 MED14O60244 1454 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 ADGRL2O95490 1459 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 CFTRP13569 1480 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 MAST2Q6P0Q8 1798 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 SIPA1L1O43166 1804 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 TRAV7A0A075B6U4 112 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 C17orf98A8MV24 154 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 K7EM74 188 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 LINC00032P0C843 101 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 CKS2P33552 79 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 ETV6P41212 452 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 LYZL1Q6UWQ5 148 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 C1orf64Q8NEQ6 169 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 CLEC2BQ92478 149 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 PSMF1Q92530 271 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 LINC00526Q96FQ7 95 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 DPY30Q9C005 99 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 LY96Q9Y6Y9 160 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 NRKQ7Z2Y5 1582 aa2.85□□□□□ -1.95
VPS50-206ENST00000443443 AKAP12Q02952 1782 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 MEGF6O75095 1541 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 BAZ1AQ9NRL2 1556 aaPredicted RBP2.84□□□□□ -1.95
VPS50-206ENST00000443443 TRPM1Q7Z4N2 1603 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 TRGV5A0A0B4J1U4 118 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 TRBV10-2A0A0K0K1G8 114 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 A0A1W2PRS3 328 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 C17orf112F2Z3M2 114 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 M0R2P5 195 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 CCL4P13236 92 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 PEBP1P30086 187 aaKnown RBP2.84□□□□□ -1.95
VPS50-206ENST00000443443 ZNF816Q0VGE8 651 aaPredicted RBP2.84□□□□□ -1.95
VPS50-206ENST00000443443 LINC00471Q8N535 108 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 Q8NDZ9 215 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 OR5AK2Q8NH90 309 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 UBALD1Q8TB05 177 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 RETNLBQ9BQ08 111 aa2.84□□□□□ -1.95
VPS50-206ENST00000443443 N4BP2Q86UW6 1770 aaPredicted RBP2.84□□□□□ -1.96
VPS50-206ENST00000443443 ARHGAP35Q9NRY4 1499 aa2.84□□□□□ -1.96
VPS50-206ENST00000443443 NISCHQ9Y2I1 1504 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 C7orf66A4D0T2 115 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 H3BQF6 201 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 H7C2G1 150 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 CISD3P0C7P0 127 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 CRYGAP11844 174 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 ASB16-AS1Q495Z4 193 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 Q6AWC8 147 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 Q6ZS52 159 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 CCL4L1Q8NHW4 92 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 LCN9Q8WX39 176 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 VAMP8Q9BV40 100 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 FAM215AQ9Y5M1 114 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 DSCAMO60469 2012 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 ATG2BQ96BY7 2078 aa2.83□□□□□ -1.96
VPS50-206ENST00000443443 LTBP1Q14766 1721 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 SBF1O95248 1867 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 FAM24AA6NFZ4 105 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 C11orf86A6NJI1 115 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 TMEM262E9PQX1 116 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 ZNF737O75373 536 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 CPSF4O95639 269 aaKnown RBP2.82□□□□□ -1.96
VPS50-206ENST00000443443 SHBGP04278 402 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 COL8A2P25067 703 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 NPC2P61916 151 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 FOXF1Q12946 379 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 ESRGQ1W209 222 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 PYY3Q5JQD4 70 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 FAM27BQ5VT28 67 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 OR2T2Q6IF00 324 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 SLC35E3Q7Z769 313 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 Q8N2B8 174 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 OTOSQ8NHW6 89 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 POP5Q969H6 163 aaKnown RBP2.82□□□□□ -1.96
VPS50-206ENST00000443443 HYLS1Q96M11 299 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 PRO1933Q9H354 126 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 CEP162Q5TB80 1403 aa2.82□□□□□ -1.96
VPS50-206ENST00000443443 MAGI1Q96QZ7 1491 aaPredicted RBP2.82□□□□□ -1.96
VPS50-206ENST00000443443 OBSL1O75147 1896 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms