RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 PSMB11A5LHX3 300 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 PRSS46E5RG02 174 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 ZNF688P0C7X2 276 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 SNRPD3P62318 126 aaKnown RBP8.33□□□□□ -1.08
CALD1-210ENST00000443197 Q6ZN92 141 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 LY6G5BQ8NDX9 201 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 FAM167A-AS1Q96KT0 104 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 GSN-AS1Q9NRJ2 163 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 ZNF138P52744 262 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 PSG3Q16557 428 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 PYY3Q5JQD4 70 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 HIST2H2BCQ6DN03 193 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 Q86TA4 180 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 C8orf49Q96NF6 230 aa8.33□□□□□ -1.08
CALD1-210ENST00000443197 PKIAP61925 76 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 DEFB104AQ8WTQ1 72 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 C18orf15Q96N68 181 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 GNB1LQ9BYB4 327 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 ACTL10Q5JWF8 245 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 LDLRAD2Q5SZI1 272 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 FAM159AQ6UWV7 190 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 Q71RC1 249 aaPredicted RBP8.32□□□□□ -1.08
CALD1-210ENST00000443197 TTC9CQ8N5M4 171 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 AP5S1Q9NUS5 200 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 V9GYV3 84 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 FN1P02751 2386 aaKnown RBP8.32□□□□□ -1.08
CALD1-210ENST00000443197 IGKV1D-37A0A075B6S9 117 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 APOHP02749 345 aaPredicted RBP8.32□□□□□ -1.08
CALD1-210ENST00000443197 SYNJ2BPP57105 145 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 NPBQ8NG41 125 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 KCNS1Q96KK3 526 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 PSMG4Q5JS54 123 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 TMEM191AQ9H0A3 160 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 LY96Q9Y6Y9 160 aa8.32□□□□□ -1.08
CALD1-210ENST00000443197 TRAV9-1A0A075B6T8 112 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
CALD1-210ENST00000443197 LYZL1Q6UWQ5 148 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 C11orf52Q96A22 123 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 ZNF503Q96F45 646 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 PRELID3AQ96N28 172 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 NRN1Q9NPD7 142 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 ANKRD17O75179 2603 aaKnown RBP8.31□□□□□ -1.08
CALD1-210ENST00000443197 IGLV11-55A0A075B6I3 123 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 H3BRN7 92 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 FXYD7P58549 80 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 CTSGP08311 255 aa8.31□□□□□ -1.08
CALD1-210ENST00000443197 TNFRSF13BO14836 293 aaPredicted RBP8.3□□□□□ -1.08
CALD1-210ENST00000443197 SH2D1AO60880 128 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 NCR2O95944 276 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
CALD1-210ENST00000443197 FANCD2OSQ96PS1 177 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 ATMQ13315 3056 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 FRMD6-AS1P0C7T7 363 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 CFHR4Q92496 578 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 ARMS2P0C7Q2 107 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 VGLL1Q99990 258 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 HSPB8Q9UJY1 196 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
CALD1-210ENST00000443197 H3BVH4 76 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
CALD1-210ENST00000443197 EVI2AP22794 236 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 DDTP30046 118 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 ZNF414Q96IQ9 312 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 PEF1Q9UBV8 284 aaKnown RBP8.29□□□□□ -1.08
CALD1-210ENST00000443197 J3QKU1 62 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 SPATA45Q537H7 98 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 USMG5Q96IX5 58 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 NDUFA3O95167 84 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 GP9P14770 177 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 GATA3P23771 443 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 G0S2P27469 103 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 FAM223BA6NKX1 122 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 ODF3BA8MYP8 253 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 PAX1P15863 534 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 NIT1Q86X76 327 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 FAM223AQ8IWN6 122 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 LYPD1Q8N2G4 141 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 DUX3Q96PT4 197 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 MAP1LC3AQ9H492 121 aa8.29□□□□□ -1.08
CALD1-210ENST00000443197 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 C14orf144Q96I85 54 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 ASPMQ8IZT6 3477 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 ZZEF1O43149 2961 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 CD7P09564 240 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 SLAQ13239 276 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 C5orf56Q8N8D9 126 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 C1orf159Q96HA4 380 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 CFAP47Q6ZTR5 3102 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 SMKR1H3BMG3 65 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 LY6LH3BQJ8 138 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 ZNF324O75467 553 aaPredicted RBP8.28□□□□□ -1.08
CALD1-210ENST00000443197 ORMDL3Q8N138 153 aa8.28□□□□□ -1.08
CALD1-210ENST00000443197 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms