RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
PTPRC-209ENST00000442510 FAM216BQ8N7L0 139 aa4.45□□□□□ -1.7
PTPRC-209ENST00000442510 NKAPP1Q8N9T2 125 aa4.45□□□□□ -1.7
PTPRC-209ENST00000442510 LYZL4Q96KX0 146 aa4.45□□□□□ -1.7
PTPRC-209ENST00000442510 MRPL33O75394 65 aaKnown RBP4.44□□□□□ -1.7
PTPRC-209ENST00000442510 PRB1P04280 392 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 MED1Q15648 1581 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-209ENST00000442510 ZNF318Q5VUA4 2279 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 IFI6P09912 130 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 FAM222AQ5U5X8 452 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 CLEC19AQ6UXS0 136 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 FAM168AQ92567 244 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 RGPD1P0DJD0 1748 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 NWD2Q9ULI1 1742 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 TRBV7-1A0A0A6YYK4 115 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 NOVP48745 357 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 CFHR1Q03591 330 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 PRB3Q04118 309 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-209ENST00000442510 MRPL51Q4U2R6 128 aaKnown RBP4.44□□□□□ -1.7
PTPRC-209ENST00000442510 GFRALQ6UXV0 394 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 NFAM1Q8NET5 270 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-209ENST00000442510 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-209ENST00000442510 TIMM21Q9BVV7 248 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 IGHV1OR15-1A0A075B7D0 117 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 IGHV5-10-1A0A0J9YXX1 117 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 TMEM178BH3BS89 294 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 LEPROTO15243 131 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 SH2D1AO60880 128 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 MYCNOSP40205 109 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 FAM27E3Q08E93 113 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 BEAN1Q3B7T3 259 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 SRXN1Q9BYN0 137 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 TPSG1Q9NRR2 321 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 PIK3C2BO00750 1634 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 KIF26BQ2KJY2 2108 aa4.44□□□□□ -1.7
PTPRC-209ENST00000442510 LAMB2P55268 1798 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 ADARB2-AS1A8MUL3 147 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 FAM19A4Q96LR4 140 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 MDFIQ99750 246 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 HEATR5BQ9P2D3 2071 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 IGHV3-64DA0A0J9YX35 117 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 A0A1W2PNR3 127 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 NANOS2P60321 138 aaKnown RBP4.43□□□□□ -1.7
PTPRC-209ENST00000442510 NDPQ00604 133 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 UPK3BQ9BT76 320 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 RBBP6Q7Z6E9 1792 aaKnown RBP4.43□□□□□ -1.7
PTPRC-209ENST00000442510 URB1O60287 2271 aaKnown RBP4.43□□□□□ -1.7
PTPRC-209ENST00000442510 IGKV1D-42A0A075B6H8 117 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 XCL1P47992 114 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 VEGFBP49765 207 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 XCL2Q9UBD3 114 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 HCFC1P51610 2035 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 IGKV6-21A0A0C4DH24 114 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 J3QT63 122 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 CLEC2BQ92478 149 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 HHLA3Q9XRX5 114 aa4.43□□□□□ -1.7
PTPRC-209ENST00000442510 TRBV27A0A0K0K1C4 114 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 ASPHD1Q5U4P2 390 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 FER1L4A9Z1Z3 1794 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 SPRY2O43597 315 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 CD52P31358 61 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 C2orf66Q6UXQ4 117 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 Q6ZS49 121 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 PLCH1Q4KWH8 1693 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 MED13Q9UHV7 2174 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 LOC101059948A0A1B0GTJ6 334 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 IGKV1-5P01602 117 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 IGLV3-25P01717 112 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 EGR2P11161 476 aaPredicted RBP4.42□□□□□ -1.7
PTPRC-209ENST00000442510 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 FXYD5Q96DB9 178 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 ESM1Q9NQ30 184 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 RTTNQ86VV8 2226 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 IGLV3-16A0A075B6K0 115 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 A0A0G2JRQ6 117 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 QRFPP83859 136 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 ZNF329Q86UD4 541 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 TRAV13-2A0A0B4J235 113 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 C17orf98A8MV24 154 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 IGHV3-13P01766 116 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 ZNF876PQ49A33 203 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 DEFB132Q7Z7B7 95 aa4.42□□□□□ -1.7
PTPRC-209ENST00000442510 ESPL1Q14674 2120 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 DOCK2Q92608 1830 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 K7EM74 188 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-209ENST00000442510 WDR86Q86TI4 376 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 Q9UF83 564 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 ARAP2Q8WZ64 1704 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 UNC13CQ8NB66 2214 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 CACNA1IQ9P0X4 2223 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 ZNF32P17041 273 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 EFNA4P52798 201 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 Q6ZRM9 215 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 FAM223AQ8IWN6 122 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 KLHDC9Q8NEP7 349 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 TRAV7A0A075B6U4 112 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 A0A1W2PP55 124 aa4.41□□□□□ -1.7
PTPRC-209ENST00000442510 PSPHP1O15172 72 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms