RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CYB5AP00167 134 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 CFDP00746 253 aaPredicted RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 CRYGAP11844 174 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 ADCYAP1P18509 176 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 DAPP51397 102 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 HMGN3Q15651 99 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 Q56UQ5 140 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 SPRNQ5BIV9 151 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 KPRPQ5T749 579 aaPredicted RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 PRR9Q5T870 116 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 LAIR2Q6ISS4 152 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 SCXQ7RTU7 201 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 OR4X2Q8NGF9 303 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 OR5D16Q8NGK9 328 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 TSLPQ969D9 159 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 POP5Q969H6 163 aaKnown RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 AQP10Q96PS8 301 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 SHANK2-AS3Q9BTD1 123 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 RGPD4Q7Z3J3 1758 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 ANK1P16157 1881 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 COL27A1Q8IZC6 1860 aaPredicted RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 BLMP54132 1417 aaPredicted RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 ALPK3Q96L96 1907 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 ZNF638Q14966 1978 aaKnown RBP2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 NOTCH2Q04721 2471 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 SYCP2Q9BX26 1530 aa2.07□□□□□ -2.08
LSM1P1-201ENST00000438629 ADGRB1O14514 1584 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 PIK3C2BO00750 1634 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 TOPAZ1Q8N9V7 1692 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 CFAP43Q8NDM7 1665 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 COL24A1Q17RW2 1714 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 NWD2Q9ULI1 1742 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 RALGAPA2Q2PPJ7 1873 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 TRBV20-1A0A075B6N2 111 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 MUC21A0A0G2JKD1 596 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 H3BMG7 143 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 M0R2P5 195 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 M0R378 163 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 NDUFB6O95139 128 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 IGKV1-5P01602 117 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 IGHV1-46P01743 117 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 CD3DP04234 171 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 CXCL1P09341 107 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 SLC25A6P12236 298 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HLA-DRB4P13762 266 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BOP23527 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BBP33778 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 ZNF80P51504 273 aaPredicted RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 CMC4P56277 68 aaPredicted RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BDP58876 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 YPEL3P61236 119 aaPredicted RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 SNRPD3P62318 126 aaKnown RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BCP62807 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 FOXF1Q12946 379 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST2H2BEQ16778 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 KRTAP13-2Q52LG2 175 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 ZNF678Q5SXM1 525 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HEPN1Q6WQI6 88 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 OR10P1Q8NGE3 313 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 OR5C1Q8NGR4 320 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 ITLN2Q8WWU7 325 aaPredicted RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 COPS9Q8WXC6 57 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 H1FXQ92522 213 aaKnown RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BHQ93079 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BNQ99877 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HIST1H2BMQ99879 126 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 AGPAT4-IT1Q9H0P7 198 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 HLA-DRB4X5D2U9 266 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 TCHHQ07283 1943 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 CHD3Q12873 2000 aaKnown RBP2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 NUP205Q92621 2012 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 PLIN4Q96Q06 1357 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 ADGRL1O94910 1474 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 PXDNQ92626 1479 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 ARHGEF12Q9NZN5 1544 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 PLXNC1O60486 1568 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 LAMC1P11047 1609 aa2.06□□□□□ -2.08
LSM1P1-201ENST00000438629 SCN4AP35499 1836 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 MIA3Q5JRA6 1907 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 DOCK4Q8N1I0 1966 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 CITO14578 2027 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 LOC107986453A0A1B0GWG9 222 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 GRIFINA4D1Z8 144 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 MCRIP1C9JLW8 97 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 APOC4-APOC2K7ER74 178 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 K7ERJ3 54 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 PLA2G10O15496 165 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 NDUFB3O43676 98 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 SYNGR2O43760 224 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 PITX3O75364 302 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 NDUFB2O95178 105 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 SIX6O95475 246 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 TRACP01848 142 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 APOC2P02655 101 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 SHBGP04278 402 aa2.05□□□□□ -2.08
LSM1P1-201ENST00000438629 SLC25A5P05141 298 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms