RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
HDAC6-208ENST00000438518 CMTM2Q8TAZ6 248 aa13.64□□□□□ -0.23
HDAC6-208ENST00000438518 RPUSD4Q96CM3 377 aaKnown RBP13.64□□□□□ -0.23
HDAC6-208ENST00000438518 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
HDAC6-208ENST00000438518 TXNDC17Q9BRA2 123 aa13.64□□□□□ -0.23
HDAC6-208ENST00000438518 HLA-DRB4X5D2U9 266 aa13.64□□□□□ -0.23
HDAC6-208ENST00000438518 SERTM2A0A1B0GWG4 89 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 PGPA6NDG6 321 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 FAM74A7A6NL05 159 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 IGHV4-30-4P0DP06 118 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 HLA-DMBP28068 263 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 C5orf17Q8NAS9 161 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 TUBA4BQ9H853 241 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 SRD5A3Q9H8P0 318 aa13.63□□□□□ -0.23
HDAC6-208ENST00000438518 DNAH3Q8TD57 4116 aa13.62□□□□□ -0.23
HDAC6-208ENST00000438518 A0A0J9YX75 114 aa13.62□□□□□ -0.23
HDAC6-208ENST00000438518 SLC25A5P05141 298 aaKnown RBP13.62□□□□□ -0.23
HDAC6-208ENST00000438518 RAB14P61106 215 aa13.62□□□□□ -0.23
HDAC6-208ENST00000438518 OR8A1Q8NGG7 326 aa13.62□□□□□ -0.23
HDAC6-208ENST00000438518 A0A1B0GV50 99 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 RBAKDNA6NC62 111 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 K7EIL1 84 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 M0R3E3 92 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 SUMO1P63165 101 aaKnown RBP13.61□□□□□ -0.23
HDAC6-208ENST00000438518 ACTL10Q5JWF8 245 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 WFDC10AQ9H1F0 79 aa13.61□□□□□ -0.23
HDAC6-208ENST00000438518 LOC102724200A0A096LPH7 203 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-208ENST00000438518 FBLL1A6NHQ2 334 aaKnown RBP13.6□□□□□ -0.23
HDAC6-208ENST00000438518 GGTLC3B5MD39 225 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 H3BMM0 161 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 K7EQM0 130 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 UBE2G2P60604 165 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
HDAC6-208ENST00000438518 HIST1H2BAQ96A08 127 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 CITED4Q96RK1 184 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 GNG13Q9P2W3 67 aa13.6□□□□□ -0.23
HDAC6-208ENST00000438518 YTHDF2Q9Y5A9 579 aaKnown RBP13.6□□□□□ -0.23
HDAC6-208ENST00000438518 A8MTW9 85 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 DIRC3C9JPN6 131 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 F6UZH7 168 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 PAGE4O60829 102 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 NMBP08949 121 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 NUTF2P61970 127 aaKnown RBP13.59□□□□□ -0.23
HDAC6-208ENST00000438518 CCL20P78556 96 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 ZNF124Q15973 351 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 MORN3Q6PF18 240 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-208ENST00000438518 CCDC28AQ8IWP9 274 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 NBEAL1Q6ZS30 2694 aa13.59□□□□□ -0.23
HDAC6-208ENST00000438518 KIR2DL5BA0A0G2JN68 375 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 KIR2DL5BA0A0G2JPC4 375 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 KNCNA6PVL3 124 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 ZNF705FA8MVS1 300 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-208ENST00000438518 NPIPB6E9PJ23 425 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 TCRAP04437 139 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 BCL2P10415 239 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 CNN1P51911 297 aaKnown RBP13.58□□□□□ -0.24
HDAC6-208ENST00000438518 APOC4P55056 127 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 IFITM2Q01629 132 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 LINC00322Q6ZN03 302 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-208ENST00000438518 C9orf47Q6ZRZ4 202 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 KIR2DL5AQ8N109 375 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 KIR2DL5BQ8NHK3 375 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 ODF3Q96PU9 254 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 ATG101Q9BSB4 218 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 EPDR1Q9UM22 224 aa13.58□□□□□ -0.24
HDAC6-208ENST00000438518 F6UB75 175 aa13.57□□□□□ -0.24
HDAC6-208ENST00000438518 PRB2P02812 416 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-208ENST00000438518 DEFA6Q01524 100 aa13.57□□□□□ -0.24
HDAC6-208ENST00000438518 HIST1H1AQ02539 215 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-208ENST00000438518 CYB561D1Q8N8Q1 229 aa13.57□□□□□ -0.24
HDAC6-208ENST00000438518 MRAPQ8TCY5 172 aa13.57□□□□□ -0.24
HDAC6-208ENST00000438518 LINC00477Q96M19 166 aa13.57□□□□□ -0.24
HDAC6-208ENST00000438518 VAX2Q9UIW0 290 aa13.57□□□□□ -0.24
HDAC6-208ENST00000438518 TRBV7-9A0A0J9YWB2 115 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 C11orf94C9JXX5 98 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 NDUFS6O75380 124 aaKnown RBP13.56□□□□□ -0.24
HDAC6-208ENST00000438518 AMBPP02760 352 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 MEF2BQ02080 365 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-208ENST00000438518 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 TMEM78Q5T7P6 136 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 C1QTNF4Q9BXJ3 329 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 PPP1R14DQ9NXH3 145 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 LENEPQ9Y5L5 61 aa13.56□□□□□ -0.24
HDAC6-208ENST00000438518 NOTCH1P46531 2555 aa13.55□□□□□ -0.24
HDAC6-208ENST00000438518 UBE2CO00762 179 aa13.55□□□□□ -0.24
HDAC6-208ENST00000438518 RGS13O14921 159 aa13.55□□□□□ -0.24
HDAC6-208ENST00000438518 PDE6DO43924 150 aa13.55□□□□□ -0.24
HDAC6-208ENST00000438518 FRMD6-AS1P0C7T7 363 aa13.55□□□□□ -0.24
HDAC6-208ENST00000438518 ATP5G3P48201 142 aa13.55□□□□□ -0.24
HDAC6-208ENST00000438518 LOC102723971A0A1B0GUV8 181 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 RBMY1BA6NDE4 496 aaKnown RBP13.54□□□□□ -0.24
HDAC6-208ENST00000438518 RBMY1EA6NEQ0 496 aaKnown RBP13.54□□□□□ -0.24
HDAC6-208ENST00000438518 PEX7O00628 323 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 RBMY1DP0C7P1 496 aaKnown RBP13.54□□□□□ -0.24
HDAC6-208ENST00000438518 DEFB1P60022 68 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms