RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
CTSD-205ENST00000438213 FXYD5Q96DB9 178 aa11.87□□□□□ -0.51
CTSD-205ENST00000438213 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
CTSD-205ENST00000438213 NEU1Q99519 415 aa11.87□□□□□ -0.51
CTSD-205ENST00000438213 X6R8D5 127 aa11.87□□□□□ -0.51
CTSD-205ENST00000438213 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 IGHV4-28A0A0C4DH34 117 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 HMSDA8MTL9 139 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 BOLA2-SMG1P6H3BVE0 249 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 TSPOP30536 169 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 RAB2AP61019 212 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 FAM122CQ6P4D5 195 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 ZNF705AQ6ZN79 300 aaPredicted RBP11.86□□□□□ -0.51
CTSD-205ENST00000438213 PQLC2Q6ZP29 291 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 Q8NAQ8 132 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 TMEM208Q9BTX3 173 aa11.86□□□□□ -0.51
CTSD-205ENST00000438213 PRAC2D3DTV9 90 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 M0R2Z0 102 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 DEFB4AO15263 64 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
CTSD-205ENST00000438213 ICAM4Q14773 271 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 SPINK13Q1W4C9 94 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 Q6ZNX1 250 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 EXOC3-AS1Q8N2X6 119 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
CTSD-205ENST00000438213 A0A0D9SG52 128 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 CXorf65A6NEN9 183 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 INSP01308 110 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
CTSD-205ENST00000438213 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
CTSD-205ENST00000438213 CSN1S1P47710 185 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 CDC34P49427 236 aaPredicted RBP11.84□□□□□ -0.51
CTSD-205ENST00000438213 RANP62826 216 aaKnown RBP11.84□□□□□ -0.51
CTSD-205ENST00000438213 ZNF345Q14585 488 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 RBMY1FQ15415 496 aaKnown RBP11.84□□□□□ -0.51
CTSD-205ENST00000438213 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
CTSD-205ENST00000438213 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 M0R3E3 92 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 HBE1P02100 147 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 CDKN1BP46527 198 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 KCNRGQ8N5I3 272 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 RPP25LQ8N5L8 163 aaKnown RBP11.83□□□□□ -0.52
CTSD-205ENST00000438213 LINC00477Q96M19 166 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 ACTR3CQ9C0K3 210 aaPredicted RBP11.83□□□□□ -0.52
CTSD-205ENST00000438213 SH3BGRL3Q9H299 93 aa11.83□□□□□ -0.52
CTSD-205ENST00000438213 NPIPB6E9PJ23 425 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 CRXO43186 299 aaPredicted RBP11.82□□□□□ -0.52
CTSD-205ENST00000438213 LEPP41159 167 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 PMS2P11Q13670 270 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 RRN3P1Q2M238 152 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 OR11H4Q8NGC9 324 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 PHYHIPLQ96FC7 376 aa11.82□□□□□ -0.52
CTSD-205ENST00000438213 TRAV12-2A0A075B6T6 113 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 AKR1C8PQ5T2L2 129 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 BAP18Q8IXM2 172 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 TMEM256Q8N2U0 113 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 ODF3Q96PU9 254 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 LINC01587Q99440 93 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 Q9H3A6 140 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
CTSD-205ENST00000438213 KANTRA0A1W2PQU2 76 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 NUPR2A6NF83 97 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
CTSD-205ENST00000438213 EIF3GO75821 320 aaKnown RBP eCLIP11.8□□□□□ -0.52
CTSD-205ENST00000438213 STAG3L2P0CL84 134 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 STAG3L3P0CL85 134 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 CT45A10P0DMU9 189 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 NANOS2P60321 138 aaKnown RBP11.8□□□□□ -0.52
CTSD-205ENST00000438213 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 ST6GAL2Q96JF0 529 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 C20orf144Q9BQM9 153 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 OTORQ9NRC9 128 aa11.8□□□□□ -0.52
CTSD-205ENST00000438213 PGPA6NDG6 321 aa11.79□□□□□ -0.52
CTSD-205ENST00000438213 CXorf1O96002 111 aa11.79□□□□□ -0.52
CTSD-205ENST00000438213 ARL14EPLP0DKL9 152 aa11.79□□□□□ -0.52
CTSD-205ENST00000438213 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
CTSD-205ENST00000438213 ERCC8Q13216 396 aa11.79□□□□□ -0.52
CTSD-205ENST00000438213 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
CTSD-205ENST00000438213 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
CTSD-205ENST00000438213 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
CTSD-205ENST00000438213 KLK5Q9Y337 293 aaPredicted RBP11.79□□□□□ -0.52
CTSD-205ENST00000438213 DNAH7Q8WXX0 4024 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 RBAKDNA6NC62 111 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 EMP1P54849 157 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 TCTE3Q8IZS6 198 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
CTSD-205ENST00000438213 HYLS1Q96M11 299 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
CTSD-205ENST00000438213 IGKV2-40A0A087WW87 121 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms