RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ASCL2Q99929 193 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
LIMK1-203ENST00000435201 CLPSL1A2RUU4 121 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 IGF1P05019 195 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 KRTDAPP60985 99 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 PRR25Q96S07 402 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 NDUFAF3Q9BU61 184 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 LOC102724200A0A096LPH7 203 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-203ENST00000435201 M0QZK8 103 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 NIT1Q86X76 327 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 BORCS7Q96B45 105 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 NDFIP1Q9BT67 221 aa12.93□□□□□ -0.34
LIMK1-203ENST00000435201 A6NDX4 124 aa12.92□□□□□ -0.34
LIMK1-203ENST00000435201 B4DSR2 109 aa12.92□□□□□ -0.34
LIMK1-203ENST00000435201 BRI3O95415 125 aa12.92□□□□□ -0.34
LIMK1-203ENST00000435201 IGHG4P01861 327 aa12.92□□□□□ -0.34
LIMK1-203ENST00000435201 GATA3P23771 443 aa12.92□□□□□ -0.34
LIMK1-203ENST00000435201 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
LIMK1-203ENST00000435201 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.91□□□□□ -0.34
LIMK1-203ENST00000435201 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 H3BUA1 57 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 SH2D1AO60880 128 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 TRGV3P03979 118 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-203ENST00000435201 NTF3P20783 257 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 RNASEKQ6P5S7 137 aaKnown RBP12.91□□□□□ -0.34
LIMK1-203ENST00000435201 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 FAM19A2Q8N3H0 131 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 RNF114Q9Y508 228 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 RBAKDNA6NC62 111 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 H3BUX3 64 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 SLC25A16P16260 332 aa12.91□□□□□ -0.34
LIMK1-203ENST00000435201 CSMD1Q96PZ7 3565 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 M0R2Z0 102 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 IGHG2P01859 326 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 BMI1P35226 326 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 RPS20P60866 119 aaKnown RBP12.9□□□□□ -0.34
LIMK1-203ENST00000435201 LY6EQ16553 131 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 DMRTA1Q5VZB9 504 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 CHCHD1Q96BP2 118 aaKnown RBP12.9□□□□□ -0.34
LIMK1-203ENST00000435201 VGLL1Q99990 258 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 HIF1ANQ9NWT6 349 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 U3KQE9 123 aa12.9□□□□□ -0.34
LIMK1-203ENST00000435201 SPTAN1Q13813 2472 aaKnown RBP12.9□□□□□ -0.34
LIMK1-203ENST00000435201 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 IGFL4Q6B9Z1 124 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 Q8N976 141 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 VAMP8Q9BV40 100 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 SRSF2Q01130 221 aaKnown RBP12.89□□□□□ -0.35
LIMK1-203ENST00000435201 CYB5R2Q6BCY4 276 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 MRPL53Q96EL3 112 aaKnown RBP12.89□□□□□ -0.35
LIMK1-203ENST00000435201 USMG5Q96IX5 58 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 SVEP1Q4LDE5 3571 aa12.89□□□□□ -0.35
LIMK1-203ENST00000435201 ACACBO00763 2458 aa12.88□□□□□ -0.35
LIMK1-203ENST00000435201 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
LIMK1-203ENST00000435201 RAB4AP20338 218 aa12.88□□□□□ -0.35
LIMK1-203ENST00000435201 ARL3P36405 182 aa12.88□□□□□ -0.35
LIMK1-203ENST00000435201 Q8TAT8 98 aa12.88□□□□□ -0.35
LIMK1-203ENST00000435201 IGHV3-66A0A0C4DH42 116 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 FAM181BA6NEQ2 426 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-203ENST00000435201 PRR31Q5SQ13 230 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 ZNF493Q6ZR52 646 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 URB1-AS1Q96HZ7 61 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 TPPP3Q9BW30 176 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 USP9XQ93008 2570 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-203ENST00000435201 FLNCQ14315 2725 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
LIMK1-203ENST00000435201 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
LIMK1-203ENST00000435201 LYZL1Q6UWQ5 148 aa12.86□□□□□ -0.35
LIMK1-203ENST00000435201 LURAP1LQ8IV03 231 aa12.86□□□□□ -0.35
LIMK1-203ENST00000435201 IGHV3OR16-13A0A075B7E8 117 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 TMSB15BA0A087X1C1 80 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 IGHV3-74A0A0B4J1X5 117 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 NDUFA4O00483 81 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
LIMK1-203ENST00000435201 COX6B1P14854 86 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 PAM16Q9Y3D7 125 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 COL12A1Q99715 3063 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 TRAV8-2A0A0B4J237 113 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 PRAC2D3DTV9 90 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 CTRLP40313 264 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 ZNF80P51504 273 aaPredicted RBP12.85□□□□□ -0.35
LIMK1-203ENST00000435201 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 NRGNQ92686 78 aa12.85□□□□□ -0.35
LIMK1-203ENST00000435201 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
LIMK1-203ENST00000435201 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
LIMK1-203ENST00000435201 LINC00614P0C842 121 aa12.84□□□□□ -0.35
LIMK1-203ENST00000435201 AVPP01185 164 aa12.83□□□□□ -0.36
LIMK1-203ENST00000435201 PRB1P04280 392 aa12.83□□□□□ -0.36
LIMK1-203ENST00000435201 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms