RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 GNLYP22749 145 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.93□□□□□ -0.34
CHFR-203ENST00000432561 FAM231BA6NCW3 169 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 H0Y8G0 127 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 TFPI2P48307 235 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 EFNA4P52798 201 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 LMO4P61968 165 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 ITLN2Q8WWU7 325 aaPredicted RBP12.93□□□□□ -0.34
CHFR-203ENST00000432561 VGLL1Q99990 258 aa12.93□□□□□ -0.34
CHFR-203ENST00000432561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■□ 21.7
CHFR-203ENST00000432561 IGHV3-49A0A0A0MS15 119 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 TMEM219Q86XT9 240 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 TXN2Q99757 166 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 TRBV6-1A0A0K0K1D8 114 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 CLEC3BP05452 202 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 LINC00614P0C842 121 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 RHOGP84095 191 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 Q6ZN92 141 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 ZNF48Q96MX3 618 aaPredicted RBP12.92□□□□□ -0.34
CHFR-203ENST00000432561 RABAC1Q9UI14 185 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 LINC00527Q9UJ94 153 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 TMEM213A2RRL7 107 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 OOSP1A8MZH6 123 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 SH2D1AO60880 128 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 IGHG4P01861 327 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 UBE2E1P51965 193 aa12.92□□□□□ -0.34
CHFR-203ENST00000432561 CSN1S1P47710 185 aa12.91□□□□□ -0.34
CHFR-203ENST00000432561 ZNF80P51504 273 aaPredicted RBP12.91□□□□□ -0.34
CHFR-203ENST00000432561 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
CHFR-203ENST00000432561 PDE6HQ13956 83 aa12.91□□□□□ -0.34
CHFR-203ENST00000432561 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
CHFR-203ENST00000432561 RPL7P18124 248 aaKnown RBP12.91□□□□□ -0.34
CHFR-203ENST00000432561 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
CHFR-203ENST00000432561 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
CHFR-203ENST00000432561 NDFIP1Q9BT67 221 aa12.91□□□□□ -0.34
CHFR-203ENST00000432561 USP9XQ93008 2570 aaPredicted RBP12.91□□□□□ -0.34
CHFR-203ENST00000432561 IGLL1P15814 213 aa12.9□□□□□ -0.34
CHFR-203ENST00000432561 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.34
CHFR-203ENST00000432561 TMEM70Q9BUB7 260 aa12.9□□□□□ -0.34
CHFR-203ENST00000432561 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.35
CHFR-203ENST00000432561 LEPROTL1O95214 131 aa12.9□□□□□ -0.35
CHFR-203ENST00000432561 PMCHL2Q9BQD1 86 aa12.9□□□□□ -0.35
CHFR-203ENST00000432561 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.35
CHFR-203ENST00000432561 RPLP1P05386 114 aaKnown RBP12.89□□□□□ -0.35
CHFR-203ENST00000432561 ZNF25P17030 456 aaPredicted RBP12.89□□□□□ -0.35
CHFR-203ENST00000432561 ERCC8Q13216 396 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 RIGQ13278 110 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 ZNF502Q8TBZ5 544 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 CSPG4Q6UVK1 2322 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 PSG9Q00887 426 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 FAM106AQ4KMX7 169 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 CCDC140Q96MF4 163 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 PRR25Q96S07 402 aa12.89□□□□□ -0.35
CHFR-203ENST00000432561 HNRNPA3P51991 378 aaKnown RBP12.88□□□□□ -0.35
CHFR-203ENST00000432561 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
CHFR-203ENST00000432561 BRD3OSQ6XYD6 125 aa12.88□□□□□ -0.35
CHFR-203ENST00000432561 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
CHFR-203ENST00000432561 CENPEQ02224 2701 aa12.88□□□□□ -0.35
CHFR-203ENST00000432561 CENPVL3A0A0U1RRI6 287 aa12.88□□□□□ -0.35
CHFR-203ENST00000432561 S100A7AQ86SG5 101 aa12.88□□□□□ -0.35
CHFR-203ENST00000432561 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
CHFR-203ENST00000432561 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
CHFR-203ENST00000432561 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 LOC389332A0A1B0GUA5 103 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 hDV102S1A0JD36 115 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 OR4C46A6NHA9 309 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 SYS1-DBNDD2H3BUS1 97 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 NPFFO15130 113 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 IGHV4-39P01824 125 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 FAM162BQ5T6X4 162 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 M0QZK8 103 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 FXYD7P58549 80 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 ZFAND3Q9H8U3 227 aa12.87□□□□□ -0.35
CHFR-203ENST00000432561 D6R8Y8 96 aa12.86□□□□□ -0.35
CHFR-203ENST00000432561 LOXL1Q08397 574 aaPredicted RBP12.86□□□□□ -0.35
CHFR-203ENST00000432561 STPG4Q8N801 248 aa12.86□□□□□ -0.35
CHFR-203ENST00000432561 PRORYQ9H606 182 aa12.86□□□□□ -0.35
CHFR-203ENST00000432561 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
CHFR-203ENST00000432561 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
CHFR-203ENST00000432561 BUB3O43684 328 aa12.85□□□□□ -0.35
CHFR-203ENST00000432561 TSPOP30536 169 aa12.85□□□□□ -0.35
CHFR-203ENST00000432561 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
CHFR-203ENST00000432561 IFI27P40305 119 aaPredicted RBP12.84□□□□□ -0.35
CHFR-203ENST00000432561 HINT1P49773 126 aaPredicted RBP12.84□□□□□ -0.35
CHFR-203ENST00000432561 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
CHFR-203ENST00000432561 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
CHFR-203ENST00000432561 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
CHFR-203ENST00000432561 PPIFP30405 207 aaKnown RBP12.84□□□□□ -0.35
CHFR-203ENST00000432561 Q6ZVH6 145 aa12.84□□□□□ -0.35
CHFR-203ENST00000432561 MSRB1Q9NZV6 116 aa12.84□□□□□ -0.35
CHFR-203ENST00000432561 ZFYVE26Q68DK2 2539 aa12.83□□□□□ -0.35
CHFR-203ENST00000432561 SCGB2A1O75556 95 aa12.83□□□□□ -0.36
CHFR-203ENST00000432561 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
CHFR-203ENST00000432561 PRSS3P2Q8NHM4 247 aa12.83□□□□□ -0.36
CHFR-203ENST00000432561 TMEM208Q9BTX3 173 aa12.83□□□□□ -0.36
CHFR-203ENST00000432561 AP5S1Q9NUS5 200 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms