RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 MYOZ3Q8TDC0 251 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 Q9HAA7 133 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 MUC3AQ02505 3323 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 K7EQG2 157 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF701M0R085 212 aaPredicted RBP3.42□□□□□ -1.86
UBE4A-202ENST00000431736 C8orf88P0DMB2 117 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 FGF8P55075 233 aaPredicted RBP3.42□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF90Q03938 601 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 ODF1Q14990 250 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 C19orf35Q6ZS72 473 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 ELF5Q9UKW6 265 aaPredicted RBP3.42□□□□□ -1.86
UBE4A-202ENST00000431736 PLXNB1O43157 2135 aa3.42□□□□□ -1.86
UBE4A-202ENST00000431736 APCP25054 2843 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 UPK1BO75841 260 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 RPL36AP83881 106 aaKnown RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 COTL1Q14019 142 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 USF2Q15853 346 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 DMRTA1Q5VZB9 504 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TMEM88Q6PEY1 159 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 Q6ZTC4 211 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 RPP25LQ8N5L8 163 aaKnown RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 OR11H4Q8NGC9 324 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TMEM263Q8WUH6 116 aaKnown RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 RPL36ALQ969Q0 106 aaKnown RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SLC25A38Q96DW6 304 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SAV1Q9H4B6 383 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 GPR132Q9UNW8 380 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 CFAP47Q6ZTR5 3102 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 NOTCH1P46531 2555 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 KALRNO60229 2985 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 IGKV1D-8A0A087WSZ0 117 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 RBFOX3A6NFN3 312 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 CRYGBP07316 175 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SPANXN1Q5VSR9 72 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 NRARPQ7Z6K4 114 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SMCO4Q9NRQ5 59 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 ANKRD20A5PA0PJZ0 165 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 M0R2Z0 102 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 GYPEP15421 78 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 PPP1R1AQ13522 171 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF56Q15929 161 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TMEM183BQ1AE95 376 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TMEM183AQ8IXX5 376 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TMED6Q8WW62 240 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 CHCHD5Q9BSY4 110 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 NKX6-2Q9C056 277 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TRAV8-1A0A0A6YYK1 113 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 I3L2K1 104 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 CDC34P49427 236 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-202ENST00000431736 ASAH1Q13510 395 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 OPCMLQ14982 345 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 RHOHQ15669 191 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 MRGPRG-AS1Q2M3A8 158 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 PRR27Q6MZM9 219 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 PQLC2Q6ZP29 291 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SFT2D1Q8WV19 159 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SEC22CQ9BRL7 303 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 A0A0D9SG52 128 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 CIDEAO60543 219 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 MGPP08493 103 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 S100A2P29034 98 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 CTF1Q16619 201 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 FAM74A4Q5TZK3 123 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 SHANK2-AS3Q9BTD1 123 aa3.41□□□□□ -1.86
UBE4A-202ENST00000431736 IGKV2D-24A0A075B6R9 120 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 IGHV1OR15-1A0A075B7D0 117 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 C9orf170A2RU37 121 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 TAAR5O14804 337 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 ODF3L2Q3SX64 289 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 MUC21Q5SSG8 566 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 MED9Q9NWA0 146 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 TNFRSF18Q9Y5U5 241 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 NSD1Q96L73 2696 aaPredicted RBP3.4□□□□□ -1.86
UBE4A-202ENST00000431736 RHODO00212 210 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 IGLC1P0CG04 106 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 EGR2P11161 476 aaPredicted RBP3.4□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF138P52744 262 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 AARDQ4LEZ3 155 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 C8orf49Q96NF6 230 aa3.4□□□□□ -1.86
UBE4A-202ENST00000431736 DBX1A6NMT0 343 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 H3BMM0 161 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 H3BTX0 84 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 NDUFB6O95139 128 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 NBEAP1P0C6P0 100 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 PEA15Q15121 130 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 TRPT1Q86TN4 253 aaKnown RBP3.4□□□□□ -1.87
UBE4A-202ENST00000431736 C1orf43Q9BWL3 253 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 NAA50Q9GZZ1 169 aaKnown RBP3.4□□□□□ -1.87
UBE4A-202ENST00000431736 PRO0255Q9UI72 69 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 VPS13AQ96RL7 3174 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 TRAV26-1A0A087WT03 109 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 RPL12P30050 165 aaKnown RBP3.4□□□□□ -1.87
UBE4A-202ENST00000431736 MIC13Q5XKP0 118 aa3.4□□□□□ -1.87
UBE4A-202ENST00000431736 OR5C1Q8NGR4 320 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms