RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CENPWQ5EE01 88 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 TMEM61Q8N0U2 210 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 LINC00482Q8N8I6 264 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 LINC00479Q96M42 142 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 MS4A6AQ9H2W1 248 aa9.09□□□□□ -0.95
RFC4-206ENST00000427785 TRBV20OR9-2A0A075B6H5 130 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 PGPEP1LA6NFU8 196 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 DIRC3C9JPN6 131 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 ISLRO14498 428 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 SAP30O75446 220 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 CSN1S1P47710 185 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 DEFB1P60022 68 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 Q86TA4 180 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 FAM24BQ8N5W8 94 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 ZNF738Q8NE65 137 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 DCANP1Q8TF63 244 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 HIST1H2BAQ96A08 127 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 NIPSNAP3BQ9BS92 247 aa9.08□□□□□ -0.96
RFC4-206ENST00000427785 TENM1Q9UKZ4 2725 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 PRAC2D3DTV9 90 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 M0R036 132 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 DNASE2O00115 360 aaPredicted RBP9.07□□□□□ -0.96
RFC4-206ENST00000427785 ZNF688P0C7X2 276 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 UBE2G1P62253 170 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 PSG3Q16557 428 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
RFC4-206ENST00000427785 C12orf54Q6X4T0 127 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 NHLRC2Q8NBF2 726 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 IGF2BP2-AS1Q96M15 143 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 ASCL2Q99929 193 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 AURKAIP1Q9NWT8 199 aaPredicted RBP9.07□□□□□ -0.96
RFC4-206ENST00000427785 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
RFC4-206ENST00000427785 IZUMO1RA6ND01 250 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 K7EQG2 157 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 ADIRFQ15847 76 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 DEFB114Q30KQ6 69 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 FAM74A3Q4VXF1 159 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 RBPMS2Q6ZRY4 209 aaKnown RBP9.06□□□□□ -0.96
RFC4-206ENST00000427785 SVBPQ8N300 66 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 C3orf56Q8N813 242 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 Q8TAT8 98 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 MRPL53Q96EL3 112 aaKnown RBP9.06□□□□□ -0.96
RFC4-206ENST00000427785 ZNF747Q9BV97 191 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 PRELID1Q9Y255 219 aa9.06□□□□□ -0.96
RFC4-206ENST00000427785 C9JCJ5 164 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 TSPAN4O14817 238 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 ID1P41134 155 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 GNG4P50150 75 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 RPL23P62829 140 aaKnown RBP9.05□□□□□ -0.96
RFC4-206ENST00000427785 ERCC8Q13216 396 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 PSMG4Q5JS54 123 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 PRNTQ86SH4 94 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 TMEM75Q8N9X5 138 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 TVP23CQ96ET8 276 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 SDF2L1Q9HCN8 221 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 SIGLEC8Q9NYZ4 499 aa9.05□□□□□ -0.96
RFC4-206ENST00000427785 F6UB75 175 aa9.04□□□□□ -0.96
RFC4-206ENST00000427785 K7EQM0 130 aa9.04□□□□□ -0.96
RFC4-206ENST00000427785 SCO1O75880 301 aa9.04□□□□□ -0.96
RFC4-206ENST00000427785 ZNF705DP0CH99 300 aaPredicted RBP9.04□□□□□ -0.96
RFC4-206ENST00000427785 ZNF705BP0CI00 300 aaPredicted RBP9.04□□□□□ -0.96
RFC4-206ENST00000427785 FLI1Q01543 452 aaPredicted RBP9.04□□□□□ -0.96
RFC4-206ENST00000427785 SAMD13Q5VXD3 122 aa9.04□□□□□ -0.96
RFC4-206ENST00000427785 VGLL1Q99990 258 aa9.04□□□□□ -0.96
RFC4-206ENST00000427785 SERTM2A0A1B0GWG4 89 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 K7EN84 100 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 SNAPINO95295 136 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 IGLV2-8P01709 118 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
RFC4-206ENST00000427785 TAS2R60P59551 318 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 PAFAH1B2P68402 229 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 LINC01551Q86U37 167 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 CLEC5AQ9NY25 188 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
RFC4-206ENST00000427785 STAB1Q9NY15 2570 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 TRAV25A0A0B4J276 109 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 LTAP01374 205 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 IGLV1-51P01701 117 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 S100A9P06702 114 aaKnown RBP9.02□□□□□ -0.97
RFC4-206ENST00000427785 SNRPD3P62318 126 aaKnown RBP9.02□□□□□ -0.97
RFC4-206ENST00000427785 HIST1H1AQ02539 215 aaPredicted RBP9.02□□□□□ -0.97
RFC4-206ENST00000427785 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
RFC4-206ENST00000427785 SHISA2Q6UWI4 295 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 BAGE2Q86Y30 109 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.97
RFC4-206ENST00000427785 OCC1Q8TAD7 63 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms