RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 IGFL4Q6B9Z1 124 aa20.35■□□□□ 0.85
SH3GL3-202ENST00000427482 HIST1H2BHQ93079 126 aa20.35■□□□□ 0.85
SH3GL3-202ENST00000427482 HIST1H2BNQ99877 126 aa20.35■□□□□ 0.85
SH3GL3-202ENST00000427482 HIST1H2BMQ99879 126 aa20.35■□□□□ 0.85
SH3GL3-202ENST00000427482 CHEK1O14757 476 aa20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 LINC00322Q6ZN03 302 aaPredicted RBP20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 GRAMD2BQ96HH9 432 aa20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 C19orf71A6NCJ1 209 aa20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 ACTL10Q5JWF8 245 aa20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 Q71RC1 249 aaPredicted RBP20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 RNF152Q8N8N0 203 aa20.34■□□□□ 0.85
SH3GL3-202ENST00000427482 CA1P00915 261 aaPredicted RBP20.33■□□□□ 0.85
SH3GL3-202ENST00000427482 TRGC1P0CF51 173 aa20.33■□□□□ 0.85
SH3GL3-202ENST00000427482 IGKV2-40A0A087WW87 121 aaPredicted RBP20.32■□□□□ 0.84
SH3GL3-202ENST00000427482 DNAJC9-AS1A6NH13 148 aa20.32■□□□□ 0.84
SH3GL3-202ENST00000427482 IGKV2D-40P01614 121 aaPredicted RBP20.32■□□□□ 0.84
SH3GL3-202ENST00000427482 TCL1AP56279 114 aa20.32■□□□□ 0.84
SH3GL3-202ENST00000427482 LCN12Q6JVE5 192 aa20.32■□□□□ 0.84
SH3GL3-202ENST00000427482 A0A1W2PS18 150 aa20.31■□□□□ 0.84
SH3GL3-202ENST00000427482 FBLL1A6NHQ2 334 aaKnown RBP20.31■□□□□ 0.84
SH3GL3-202ENST00000427482 C8orf86Q6ZUL3 223 aa20.31■□□□□ 0.84
SH3GL3-202ENST00000427482 GPHB5Q86YW7 130 aa20.31■□□□□ 0.84
SH3GL3-202ENST00000427482 GBGT1Q8N5D6 347 aa20.31■□□□□ 0.84
SH3GL3-202ENST00000427482 ZNF705FA8MVS1 300 aaPredicted RBP20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 FAM106AQ4KMX7 169 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 ZC2HC1AQ96GY0 325 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 RPP21Q9H633 154 aaKnown RBP20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 DAZ1Q9NQZ3 744 aaKnown RBP20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 SONP18583 2426 aaKnown RBP20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 TRAV8-2A0A0B4J237 113 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 IGHV7-4-1A0A0J9YVY3 117 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 P01737 135 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 LGALS1P09382 135 aaKnown RBP20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 UBE2E2Q96LR5 201 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 ASCL2Q99929 193 aa20.3■□□□□ 0.84
SH3GL3-202ENST00000427482 FASNP49327 2511 aaKnown RBP20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 K7EMT4 169 aa20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 UBE2CO00762 179 aa20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 CT83Q5H943 113 aa20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 RNF182Q8N6D2 247 aa20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 TSKUQ8WUA8 353 aa20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 DAZAP1Q96EP5 407 aaKnown RBP20.29■□□□□ 0.84
SH3GL3-202ENST00000427482 TM4SF20Q53R12 229 aa20.28■□□□□ 0.84
SH3GL3-202ENST00000427482 MRPL53Q96EL3 112 aaKnown RBP20.28■□□□□ 0.84
SH3GL3-202ENST00000427482 IZUMO1RA6ND01 250 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 NPIPB6E9PJ23 425 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 FABP9Q0Z7S8 132 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 TRAPPC1Q9Y5R8 145 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 FAM181BA6NEQ2 426 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 NDUFA6P56556 154 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 RPL19P84098 196 aaKnown RBP20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 VGLL1Q99990 258 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 ESM1Q9NQ30 184 aa20.27■□□□□ 0.84
SH3GL3-202ENST00000427482 HECTD1Q9ULT8 2610 aa20.26■□□□□ 0.83
SH3GL3-202ENST00000427482 C8orf49Q96NF6 230 aa20.26■□□□□ 0.83
SH3GL3-202ENST00000427482 ACANP16112 2415 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 PRAC2D3DTV9 90 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 OR4B1Q8NGF8 309 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 RHPN1-AS1Q9BWJ2 59 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 CLEC5AQ9NY25 188 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 SMPXQ9UHP9 88 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 RBAKDNA6NC62 111 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 Q6ZSV7 163 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 COX8CQ7Z4L0 72 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 KLHDC1Q8N7A1 406 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 NEU1Q99519 415 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 NAT8BQ9UHF3 227 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 UFC1Q9Y3C8 167 aa20.25■□□□□ 0.83
SH3GL3-202ENST00000427482 A8MWL6 223 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 SPINK4O60575 86 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 FRMD6-AS1P0C7T7 363 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 CBLN1P23435 193 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 SAPCD1Q5SSQ6 148 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 NUP35Q8NFH5 326 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 PRR25Q96S07 402 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 TMEM160Q9NX00 188 aa20.24■□□□□ 0.83
SH3GL3-202ENST00000427482 C16orf92Q96LL3 132 aa20.23■□□□□ 0.83
SH3GL3-202ENST00000427482 CRIP1P50238 77 aa20.23■□□□□ 0.83
SH3GL3-202ENST00000427482 IGHV4OR15-8A0A075B7B6 117 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 A0A087WW49 117 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 HIGD1CA8MV81 97 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 CT45A10P0DMU9 189 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 HOXA5P20719 270 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 SCGB2A2Q13296 93 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 COX19Q49B96 90 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 Q8TAT8 98 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 GNB1LQ9BYB4 327 aa20.22■□□□□ 0.83
SH3GL3-202ENST00000427482 SOCS3O14543 225 aa20.21■□□□□ 0.83
SH3GL3-202ENST00000427482 MRPL54Q6P161 138 aaKnown RBP20.21■□□□□ 0.83
SH3GL3-202ENST00000427482 GFRA4Q9GZZ7 299 aa20.21■□□□□ 0.83
SH3GL3-202ENST00000427482 EDN2P20800 178 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 WDR73Q6P4I2 378 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 REC114Q7Z4M0 266 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 ANK3Q12955 4377 aaKnown RBP20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 SNURFLB1AK76 121 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 ERCC8Q13216 396 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 OR2D3Q8NGH3 330 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 GTSF1Q8WW33 167 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 NRN1Q9NPD7 142 aa20.2■□□□□ 0.82
SH3GL3-202ENST00000427482 MYO9AB2RTY4 2548 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms