RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 DNAJC4Q9NNZ3 241 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TRGV1A0A0A0MS02 117 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 NAP1L6A6NFF2 107 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 CENPXA8MT69 81 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 AGPAT2O15120 278 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TSC22D2O75157 780 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 METTL15P1P0C7V9 234 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 ZNF846Q147U1 533 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 MRPL23Q16540 153 aaKnown RBP8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 GFI1BQ5VTD9 330 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 LYPD1Q8N2G4 141 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 DYNC2LI1Q8TCX1 351 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 PFDN5Q99471 154 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 C20orf85Q9H1P6 137 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 GSKIPQ9P0R6 139 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 FUT9Q9Y231 359 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 PRELID1Q9Y255 219 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 TIMM9Q9Y5J7 89 aa8.47□□□□□ -1.05
HLA-DQB3-203ENST00000425319 DNAH2Q9P225 4427 aa8.46□□□□□ -1.05
HLA-DQB3-203ENST00000425319 A0A096LPF7 62 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 C9orf170A2RU37 121 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 HOXA5P20719 270 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 EVI2AP22794 236 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SLC38A11Q08AI6 406 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 EIF4E3Q8N5X7 224 aaKnown RBP8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 C18orf15Q96N68 181 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SOSTQ9BQB4 213 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 AAMDCQ9H7C9 122 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PRO0255Q9UI72 69 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 BOLA1Q9Y3E2 137 aa8.46□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NACAE9PAV3 2078 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 C7orf71A4D174 169 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 RGS13O14921 159 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 MPDU1O75352 247 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NXPH4O95158 308 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 GPX1P07203 203 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 HIST1H1EP10412 219 aaKnown RBP8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 BCAP31P51572 246 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 IAH1Q2TAA2 248 aaPredicted RBP8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 CNPY1Q3B7I2 92 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TMEM14EPQ6UXP3 125 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PATE2Q6UY27 113 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 Q6ZTI0 123 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ZNF431Q8TF32 576 aaPredicted RBP8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 LY96Q9Y6Y9 160 aa8.45□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ZNF324O75467 553 aaPredicted RBP8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SNRPCP09234 159 aaKnown RBP8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SMIM18P0DKX4 95 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PVALBP20472 110 aaPredicted RBP8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 CAMLGP49069 296 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ANXA2RQ3ZCQ2 193 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NEGR1Q7Z3B1 354 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 GSN-AS1Q9NRJ2 163 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 HHLA3Q9XRX5 114 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PKHD1P08F94 4074 aa8.44□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TRGV4A0A0C4DH28 118 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NPIPB6E9PJ23 425 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 MRPS12O15235 138 aaKnown RBP8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PSCAO43653 123 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ZNF253O75346 499 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 OR4E1P0C645 316 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 RNASE4P34096 147 aaKnown RBP8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SPANXN2Q5MJ10 180 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TMEM78Q5T7P6 136 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PARD6GQ9BYG4 376 aaPredicted RBP8.43□□□□□ -1.06
HLA-DQB3-203ENST00000425319 H3BTX0 84 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NMBP08949 121 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 GCSHP23434 173 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ICAM4Q14773 271 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 KIR3DS1Q14943 382 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 OPCMLQ14982 345 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 IBA57Q5T440 356 aaKnown RBP8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 Q5VSD8 79 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TRIQKQ629K1 86 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 C10orf126Q8N4M7 172 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ST6GAL2Q96JF0 529 aa8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SLIRPQ9GZT3 109 aaKnown RBP8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
HLA-DQB3-203ENST00000425319 CCDC160A6NGH7 325 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PRAC2D3DTV9 90 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ORM1P02763 201 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 IGLC2P0DOY2 106 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PRB4P10163 310 aaPredicted RBP8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SRIP30626 198 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 CAV2P51636 162 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TCL1AP56279 114 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 LYPD5Q6UWN5 251 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NRARPQ7Z6K4 114 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TMEM37Q8WXS4 190 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms