RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TMEM263Q8WUH6 116 aaKnown RBP8.85□□□□□ -0.99
LINC00339-203ENST00000420503 HIGD1AQ9Y241 93 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 A0A087X0K7 114 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 C7orf66A4D0T2 115 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 PMS2P5A8MQ11 134 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 MED6O75586 246 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 CFDP00746 253 aaPredicted RBP8.84□□□□□ -0.99
LINC00339-203ENST00000420503 DNAH10OSP0CZ25 163 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 M6PRP20645 277 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 CDKN1BP46527 198 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 B2MP61769 119 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
LINC00339-203ENST00000420503 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
LINC00339-203ENST00000420503 HAMPP81172 84 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 SLC38A11Q08AI6 406 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 IL15RAQ13261 267 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 Q6ZTI0 123 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 TMEM256Q8N2U0 113 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 VSIG2Q96IQ7 327 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 GPR82Q96P67 336 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 UPK3BQ9BT76 320 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 GPN1Q9HCN4 374 aaPredicted RBP8.84□□□□□ -0.99
LINC00339-203ENST00000420503 PPP1R14DQ9NXH3 145 aa8.84□□□□□ -0.99
LINC00339-203ENST00000420503 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
LINC00339-203ENST00000420503 A0A096LPF7 62 aa8.83□□□□□ -1
LINC00339-203ENST00000420503 HYPMO75409 117 aa8.83□□□□□ -1
LINC00339-203ENST00000420503 INAFM2P0DMQ5 153 aa8.83□□□□□ -1
LINC00339-203ENST00000420503 RPL7P18124 248 aaKnown RBP8.83□□□□□ -1
LINC00339-203ENST00000420503 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
LINC00339-203ENST00000420503 KRTAP10-1P60331 282 aa8.83□□□□□ -1
LINC00339-203ENST00000420503 TTC32Q5I0X7 151 aa8.83□□□□□ -1
LINC00339-203ENST00000420503 CIB3Q96Q77 187 aaPredicted RBP8.83□□□□□ -1
LINC00339-203ENST00000420503 RCL1Q9Y2P8 373 aaKnown RBP8.83□□□□□ -1
LINC00339-203ENST00000420503 H7BYZ3 331 aa8.82□□□□□ -1
LINC00339-203ENST00000420503 MBPP02686 304 aaPredicted RBP8.82□□□□□ -1
LINC00339-203ENST00000420503 RAP2BP61225 183 aa8.82□□□□□ -1
LINC00339-203ENST00000420503 LYPD1Q8N2G4 141 aa8.82□□□□□ -1
LINC00339-203ENST00000420503 C2orf50Q96LR7 162 aa8.82□□□□□ -1
LINC00339-203ENST00000420503 ARL6Q9H0F7 186 aa8.82□□□□□ -1
LINC00339-203ENST00000420503 GSKIPQ9P0R6 139 aa8.82□□□□□ -1
LINC00339-203ENST00000420503 STRAPQ9Y3F4 350 aaKnown RBP8.82□□□□□ -1
LINC00339-203ENST00000420503 C5orf51A6NDU8 294 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 FAM25EA8MYX2 175 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 SSSCA1O60232 199 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 PLP1P60201 277 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 ARL16Q0P5N6 197 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 Q5VSD8 79 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 ZNF493Q6ZR52 646 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 OR10J6PQ8NGY7 276 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 LRRC20Q8TCA0 184 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 SMIM8Q96KF7 97 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 ARV1Q9H2C2 271 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 C11orf1Q9H5F2 150 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 ZNF331Q9NQX6 463 aaPredicted RBP8.81□□□□□ -1
LINC00339-203ENST00000420503 MDFICQ9P1T7 246 aa8.81□□□□□ -1
LINC00339-203ENST00000420503 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 TRAV12-3A0A0B4J271 114 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 H3BQ15 152 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 K7EPK0 472 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 SCGB1D2O95969 90 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
LINC00339-203ENST00000420503 RLN2P04090 185 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 METTL15P1P0C7V9 234 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 CT45A10P0DMU9 189 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 H2BFSP57053 126 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 TAS2R30P59541 319 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 RGS21Q2M5E4 152 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 ZNF503Q96F45 646 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 PSENENQ9NZ42 101 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 ALG5Q9Y673 324 aa8.8□□□□□ -1
LINC00339-203ENST00000420503 A0A1W2PPQ1 181 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 GOSR2O14653 212 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 TSC22D2O75157 780 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 SIX6O95475 246 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 RPP30P78346 268 aaKnown RBP8.79□□□□□ -1
LINC00339-203ENST00000420503 RAB32Q13637 225 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 TMEM14EPQ6UXP3 125 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 Q6ZQT7 251 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 NMES1Q9C002 83 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 GSN-AS1Q9NRJ2 163 aa8.79□□□□□ -1
LINC00339-203ENST00000420503 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
LINC00339-203ENST00000420503 IGHV3-53P01767 116 aa8.78□□□□□ -1
LINC00339-203ENST00000420503 OPCMLQ14982 345 aa8.78□□□□□ -1
LINC00339-203ENST00000420503 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
LINC00339-203ENST00000420503 C11orf72Q8NBR9 251 aa8.78□□□□□ -1
LINC00339-203ENST00000420503 TMEM37Q8WXS4 190 aa8.78□□□□□ -1
LINC00339-203ENST00000420503 LSM5Q9Y4Y9 91 aaKnown RBP8.78□□□□□ -1
LINC00339-203ENST00000420503 SNURFLB1AK76 121 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 SSNA1O43805 119 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 NXPH4O95158 308 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 ERCC8Q13216 396 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 TEPPQ6URK8 271 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 MGST2Q99735 147 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 KLF12Q9Y4X4 402 aa8.77□□□□□ -1.01
LINC00339-203ENST00000420503 H3BNG1 76 aa8.76□□□□□ -1.01
LINC00339-203ENST00000420503 CYCSP99999 105 aaKnown RBP8.76□□□□□ -1.01
LINC00339-203ENST00000420503 CD300CQ08708 224 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms