RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 IGHV4-28A0A0C4DH34 117 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 SMIM9A6NGZ8 99 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 G3V3Q6 166 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 DEFB4AO15263 64 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 NBEAP1P0C6P0 100 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 OR2G3Q8NGZ4 309 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 RNF141Q8WVD5 230 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 FXYD5Q96DB9 178 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 MRPL53Q96EL3 112 aaKnown RBP13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
ECHDC3-202ENST00000420401 IGHV3OR16-12A0A075B7B8 117 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 CXorf65A6NEN9 183 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 ARPC5O15511 151 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 NDUFB4O95168 129 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 MBP02144 154 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 OR10J4P0C629 311 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 ATP6V0CP27449 155 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 SPINK13Q1W4C9 94 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 OR10G4Q8NGN3 311 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 OR10G9Q8NGN4 311 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 OR10G7Q8NGN6 311 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 C11orf45Q8TAV5 145 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 NEU1Q99519 415 aa13.16□□□□□ -0.3
ECHDC3-202ENST00000420401 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 M0R2Z0 102 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 TAAR5O14804 337 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 INSP01308 110 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 RBMY1A1P0DJD3 496 aaKnown RBP13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 RBMY1CP0DJD4 496 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 SERF2P84101 59 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 RBMY1FQ15415 496 aaKnown RBP13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
ECHDC3-202ENST00000420401 ALMS1Q8TCU4 4167 aa13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 SMLR1H3BR10 107 aa13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 RAB2AP61019 212 aa13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 UBE2L3P68036 154 aaKnown RBP13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 RPL7L1Q6DKI1 246 aaKnown RBP13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 FAM122CQ6P4D5 195 aa13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 EXOC3-AS1Q8N2X6 119 aa13.14□□□□□ -0.31
ECHDC3-202ENST00000420401 TSPOP30536 169 aa13.13□□□□□ -0.31
ECHDC3-202ENST00000420401 ICAM4Q14773 271 aa13.13□□□□□ -0.31
ECHDC3-202ENST00000420401 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
ECHDC3-202ENST00000420401 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
ECHDC3-202ENST00000420401 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 NUPR2A6NF83 97 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 M0R3E3 92 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 HBE1P02100 147 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 CDKN1BP46527 198 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 NANOS2P60321 138 aaKnown RBP13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 ZNF503Q96F45 646 aa13.12□□□□□ -0.31
ECHDC3-202ENST00000420401 TRAV12-2A0A075B6T6 113 aa13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 CDC34P49427 236 aaPredicted RBP13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 RANP62826 216 aaKnown RBP13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 BAP18Q8IXM2 172 aa13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 RPP25LQ8N5L8 163 aaKnown RBP13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
ECHDC3-202ENST00000420401 LY6G6CO95867 125 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 LEPP41159 167 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 CSN1S1P47710 185 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 ZNF345Q14585 488 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 RRN3P1Q2M238 152 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 PHYHIPLQ96FC7 376 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
ECHDC3-202ENST00000420401 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 CT45A10P0DMU9 189 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 Q6ZNX1 250 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 LINC00476Q8WZB0 136 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 LINC01587Q99440 93 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 ARPC5LQ9BPX5 153 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 ACTR3CQ9C0K3 210 aaPredicted RBP13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 Q9H3A6 140 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 FRAS1Q86XX4 4008 aa13.09□□□□□ -0.31
ECHDC3-202ENST00000420401 A0A0D9SG52 128 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 EMP1P54849 157 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 KCNRGQ8N5I3 272 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 RXFP4Q8TDU9 374 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 RAB24Q969Q5 203 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 C20orf144Q9BQM9 153 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
ECHDC3-202ENST00000420401 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 STAG3L2P0CL84 134 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 STAG3L3P0CL85 134 aa13.07□□□□□ -0.32
ECHDC3-202ENST00000420401 ERCC8Q13216 396 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms