RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 ERASQ7Z444 233 aa11.94□□□□□ -0.5
SEC24D-202ENST00000419654 SRSF8Q9BRL6 282 aaKnown RBP11.94□□□□□ -0.5
SEC24D-202ENST00000419654 IGKV2-40A0A087WW87 121 aaPredicted RBP11.93□□□□□ -0.5
SEC24D-202ENST00000419654 LOC102724200A0A096LPH7 203 aaPredicted RBP11.93□□□□□ -0.5
SEC24D-202ENST00000419654 IGKV2D-40P01614 121 aaPredicted RBP11.93□□□□□ -0.5
SEC24D-202ENST00000419654 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 DSCR9P59020 149 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 ZNF492Q9P255 531 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 CHD6Q8TD26 2715 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 SAA4P35542 130 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 TCTAP57738 103 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 C5orf64Q2M2E5 130 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
SEC24D-202ENST00000419654 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 DLEU1O43261 78 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 Q8TAT8 98 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 ZNF414Q96IQ9 312 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 TMEM70Q9BUB7 260 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 CSMD2Q7Z408 3487 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 CENPVL3A0A0U1RRI6 287 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 NDUFB8O95169 186 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 LINC00614P0C842 121 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 TSPOP30536 169 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 TMEM14CQ9P0S9 112 aa11.92□□□□□ -0.5
SEC24D-202ENST00000419654 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 GOLT1BQ9Y3E0 138 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 TRAV9-2A0A087WT02 112 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
SEC24D-202ENST00000419654 IGHV3-66A0A0C4DH42 116 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 NPFFO15130 113 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
SEC24D-202ENST00000419654 FAM106CPP0CH98 169 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 COL5A1-AS1Q5SY13 56 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
SEC24D-202ENST00000419654 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
SEC24D-202ENST00000419654 TMEM213A2RRL7 107 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 PSG3Q16557 428 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 ARPC1AQ92747 370 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 CENPEQ02224 2701 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 A0A1B0GUT8 65 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 NPIPB6E9PJ23 425 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 KLHDC1Q8N7A1 406 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 SMIM12Q96EX1 92 aa11.9□□□□□ -0.5
SEC24D-202ENST00000419654 F8W735 103 aaPredicted RBP11.9□□□□□ -0.51
SEC24D-202ENST00000419654 CT83Q5H943 113 aa11.9□□□□□ -0.51
SEC24D-202ENST00000419654 C1RLQ9NZP8 487 aa11.9□□□□□ -0.51
SEC24D-202ENST00000419654 MRPS12O15235 138 aaKnown RBP11.89□□□□□ -0.51
SEC24D-202ENST00000419654 TMEM11P17152 192 aa11.89□□□□□ -0.51
SEC24D-202ENST00000419654 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
SEC24D-202ENST00000419654 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
SEC24D-202ENST00000419654 SYS1-DBNDD2H3BUS1 97 aa11.89□□□□□ -0.51
SEC24D-202ENST00000419654 MFAP4P55083 255 aa11.89□□□□□ -0.51
SEC24D-202ENST00000419654 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
SEC24D-202ENST00000419654 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
SEC24D-202ENST00000419654 SNAI2O43623 268 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 SLC25A16P16260 332 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 TMEM75Q8N9X5 138 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 K7EQM0 130 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 MSMBP08118 114 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 LOXL1Q08397 574 aaPredicted RBP11.88□□□□□ -0.51
SEC24D-202ENST00000419654 LYZL1Q6UWQ5 148 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 AAMDCQ9H7C9 122 aa11.88□□□□□ -0.51
SEC24D-202ENST00000419654 IGHV1-69DA0A0B4J2H0 117 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 WI2-2373I1.2A0A1W2PRP0 233 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 HAX1O00165 279 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 TCF21O43680 179 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 SMKR1H3BMG3 65 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 Q8N9W7 124 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 VGLL1Q99990 258 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
SEC24D-202ENST00000419654 NPIPB5A8MRT5 1133 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 CT45A10P0DMU9 189 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 KRTAP10-9P60411 292 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.86□□□□□ -0.513e-7■■■■□ 21.2
SEC24D-202ENST00000419654 TENM4Q6N022 2769 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 A0A096LNT2 108 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 ZNF207O43670 478 aaKnown RBP11.86□□□□□ -0.51
SEC24D-202ENST00000419654 PRSS3P2Q8NHM4 247 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 SOX21Q9Y651 276 aaPredicted RBP11.86□□□□□ -0.51
SEC24D-202ENST00000419654 POLQO75417 2590 aa11.86□□□□□ -0.51
SEC24D-202ENST00000419654 IGHV3OR16-10A0A075B7F0 116 aa11.85□□□□□ -0.51
SEC24D-202ENST00000419654 LINC01548A6NM66 108 aa11.85□□□□□ -0.51
SEC24D-202ENST00000419654 B4DSR2 109 aa11.85□□□□□ -0.51
SEC24D-202ENST00000419654 SH2D1AO60880 128 aa11.85□□□□□ -0.51
SEC24D-202ENST00000419654 NCR2O95944 276 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms