RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MS4A6AQ9H2W1 248 aa11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 AKAP6Q13023 2319 aa11.95□□□□□ -0.5
SEMA3B-203ENST00000419007 IGKV2-40A0A087WW87 121 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 IGHV3-35A0A0C4DH35 117 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 CD3EP07766 207 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 HIST1H1AQ02539 215 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 IGFL4Q6B9Z1 124 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 WFDC3Q8IUB2 231 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 BSNQ9UPA5 3926 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 PRELID3AQ96N28 172 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 RAXQ9Y2V3 346 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 SMKR1H3BMG3 65 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 OVOL3O00110 214 aa11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-203ENST00000419007 KLRD1Q13241 179 aa11.93□□□□□ -0.5
SEMA3B-203ENST00000419007 IGF2-ASQ6U949 168 aa11.93□□□□□ -0.5
SEMA3B-203ENST00000419007 Q8TAT8 98 aa11.93□□□□□ -0.5
SEMA3B-203ENST00000419007 SIGLEC8Q9NYZ4 499 aa11.93□□□□□ -0.5
SEMA3B-203ENST00000419007 K7EP13 123 aa11.93□□□□□ -0.5
SEMA3B-203ENST00000419007 PSG9Q00887 426 aa11.93□□□□□ -0.5
SEMA3B-203ENST00000419007 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 B9A039 149 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 COX8AP10176 69 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 NBR2O15453 112 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 SH2D1AO60880 128 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 S100A7P31151 101 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 CACNG7P62955 275 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 TWIST1Q15672 202 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 SVEP1Q4LDE5 3571 aa11.92□□□□□ -0.5
SEMA3B-203ENST00000419007 CACNA1AO00555 2505 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 C7orf71A4D174 169 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 PAX2Q02962 417 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 ORMDL3Q8N138 153 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 Q6AWC8 147 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 LYPD1Q8N2G4 141 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 Q8NA96 180 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 A0A1B0GW15 77 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 CKS2P33552 79 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 RHOGP84095 191 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 JKAMPQ9P055 326 aa11.91□□□□□ -0.5
SEMA3B-203ENST00000419007 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 CD5LO43866 347 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 C2orf91Q6ZV80 131 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 CST9LQ9H4G1 147 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 DPM3Q9P2X0 92 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 MFAP4P55083 255 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
SEMA3B-203ENST00000419007 A0A096LNJ9 63 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 TRBV6-1A0A0K0K1D8 114 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 THYN1Q9P016 225 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 PKD1L2Q7Z442 2459 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 HLA-DMBP28068 263 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 CDKN1BP46527 198 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 ZNF672Q499Z4 452 aaPredicted RBP11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 MRPL51Q4U2R6 128 aaKnown RBP11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 MRPS12O15235 138 aaKnown RBP11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 ORM1P02763 201 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 NMUP48645 174 aa11.89□□□□□ -0.51
SEMA3B-203ENST00000419007 GRNP28799 593 aaKnown RBP11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 TMEM95Q3KNT9 176 aa11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 RAB1BQ9H0U4 201 aa11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 RABAC1Q9UI14 185 aa11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 LY6LH3BQJ8 138 aa11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 RNF5Q99942 180 aa11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
SEMA3B-203ENST00000419007 EPG5Q9HCE0 2579 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 WI2-2373I1.2A0A1W2PRP0 233 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 NPYP01303 97 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 S100A7AQ86SG5 101 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 RAB37Q96AX2 223 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 VGLL1Q99990 258 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 GAGE12BA1L429 117 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 PRSS57Q6UWY2 283 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 SPTAN1Q13813 2472 aaKnown RBP11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 HBDP02042 147 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 C5orf64Q2M2E5 130 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 OCIAD2Q56VL3 154 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 FER1L6-AS1Q8NA97 138 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
SEMA3B-203ENST00000419007 A6NJY4 79 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 ZNF493Q6ZR52 646 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 PRR25Q96S07 402 aa11.86□□□□□ -0.51
SEMA3B-203ENST00000419007 SRSF8Q9BRL6 282 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms