RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 C21orf62Q9NYP8 219 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 SH2D1AO60880 128 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 NDUFS7O75251 213 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 VGLL1Q99990 258 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 PRTN3P24158 256 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-208ENST00000417496 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 TIMD4Q96H15 378 aa11.31□□□□□ -0.6
HDAC9-208ENST00000417496 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 ODF3BA8MYP8 253 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 HSBP1L1C9JCN9 74 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 ZFP36P26651 326 aaKnown RBP11.3□□□□□ -0.6
HDAC9-208ENST00000417496 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-208ENST00000417496 SLC25A34Q6PIV7 304 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 ZNF747Q9BV97 191 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 HSPB8Q9UJY1 196 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 A0A087X0K7 114 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 CTSGP08311 255 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 EGR2P11161 476 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-208ENST00000417496 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 SMAD5-AS1Q9Y6J3 95 aa11.3□□□□□ -0.6
HDAC9-208ENST00000417496 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 A0A096LNJ9 63 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 CSN1S1P47710 185 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 OR8A1Q8NGG7 326 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 NCOR2Q9Y618 2525 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 IGHV3-66A0A0C4DH42 116 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 SIGLEC8Q9NYZ4 499 aa11.29□□□□□ -0.6
HDAC9-208ENST00000417496 SPTBN4Q9H254 2564 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 IGHG4P01861 327 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 PRR25Q96S07 402 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
HDAC9-208ENST00000417496 ERCC8Q13216 396 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 UBE2V1Q13404 147 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 PDE6HQ13956 83 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 FBXL19-AS1Q494R0 122 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 BVES-AS1Q5T3Y7 98 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 A0A1W2PPR1 153 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 M0R1W7 72 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 GAS8-AS1O95177 125 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 TMEM11P17152 192 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 TWIST1Q15672 202 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
HDAC9-208ENST00000417496 GPR183P32249 361 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
HDAC9-208ENST00000417496 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 PRAC2D3DTV9 90 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
HDAC9-208ENST00000417496 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
HDAC9-208ENST00000417496 VAMP3Q15836 100 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 RNASE8Q8TDE3 154 aaKnown RBP11.26□□□□□ -0.61
HDAC9-208ENST00000417496 MSRB2Q9Y3D2 182 aa11.26□□□□□ -0.61
HDAC9-208ENST00000417496 IGHV3-49A0A0A0MS15 119 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 CBY3A6NI87 242 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 PSG9Q00887 426 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 Q6AWC8 147 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 C11orf71Q6IPW1 123 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 THYN1Q9P016 225 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 LINC01548A6NM66 108 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 TAX1BP3O14907 124 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 Q8N6K4 173 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 RABAC1Q9UI14 185 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 RAXQ9Y2V3 346 aa11.25□□□□□ -0.61
HDAC9-208ENST00000417496 A0A1B0GW15 77 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 NPYP01303 97 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 ORM1P02763 201 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 CLEC3BP05452 202 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 RHOGP84095 191 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 CKS2P33552 79 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 Q8N9W7 124 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
HDAC9-208ENST00000417496 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms