RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 GLMPQ8WWB7 406 aa14.72□□□□□ -0.05
RAB3IP-205ENST00000417413 GRAMD2BQ96HH9 432 aa14.72□□□□□ -0.05
RAB3IP-205ENST00000417413 ZFP30Q9Y2G7 519 aa14.72□□□□□ -0.05
RAB3IP-205ENST00000417413 FLNAP21333 2647 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-205ENST00000417413 CA1P00915 261 aaPredicted RBP14.71□□□□□ -0.05
RAB3IP-205ENST00000417413 FABP9Q0Z7S8 132 aa14.71□□□□□ -0.05
RAB3IP-205ENST00000417413 IGFL4Q6B9Z1 124 aa14.71□□□□□ -0.05
RAB3IP-205ENST00000417413 PEF1Q9UBV8 284 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-205ENST00000417413 CHEK1O14757 476 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 NDUFA6P56556 154 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 MYOZ3Q8TDC0 251 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 DUX5Q96PT3 197 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 MYO9AB2RTY4 2548 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 TCL1AP56279 114 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 FOXE3Q13461 319 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 SLC50A1Q9BRV3 221 aa14.7□□□□□ -0.06
RAB3IP-205ENST00000417413 FLNBO75369 2602 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 IGKV2-40A0A087WW87 121 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 LY6G6DO95868 133 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 IGKV2D-40P01614 121 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 RPLP1P05386 114 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 ELANEP08246 267 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 FRMD6-AS1P0C7T7 363 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 MEOX2P50222 304 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 SLC35B1P78383 322 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 LCN12Q6JVE5 192 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 ZC2HC1AQ96GY0 325 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 ASCL2Q99929 193 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 RPP21Q9H633 154 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 TRAPPC1Q9Y5R8 145 aa14.69□□□□□ -0.06
RAB3IP-205ENST00000417413 TRAV8-2A0A0B4J237 113 aa14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 IZUMO1RA6ND01 250 aa14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 ZNF705FA8MVS1 300 aaPredicted RBP14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 NPIPB6E9PJ23 425 aa14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 SRD5A1P18405 259 aa14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 HOXA5P20719 270 aa14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 TSKUQ8WUA8 353 aa14.68□□□□□ -0.06
RAB3IP-205ENST00000417413 SMUG1Q53HV7 270 aa14.67□□□□□ -0.06
RAB3IP-205ENST00000417413 CT83Q5H943 113 aa14.67□□□□□ -0.06
RAB3IP-205ENST00000417413 RNF152Q8N8N0 203 aa14.67□□□□□ -0.06
RAB3IP-205ENST00000417413 FBLL1A6NHQ2 334 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 P01737 135 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 C8orf86Q6ZUL3 223 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 GPHB5Q86YW7 130 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 GBGT1Q8N5D6 347 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 RNF182Q8N6D2 247 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 K7EMT4 169 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 CBLN1P23435 193 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 CRIP1P50238 77 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 COX8CQ7Z4L0 72 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 ZNF418Q8TF45 676 aaPredicted RBP14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 DAZAP1Q96EP5 407 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 C8orf49Q96NF6 230 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 VGLL1Q99990 258 aa14.66□□□□□ -0.06
RAB3IP-205ENST00000417413 IGHV7-4-1A0A0J9YVY3 117 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 PRAC2D3DTV9 90 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 SPINK4O60575 86 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 TM4SF20Q53R12 229 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 NUP35Q8NFH5 326 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 MRPL53Q96EL3 112 aaKnown RBP14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 NEU1Q99519 415 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 GNB1LQ9BYB4 327 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 NAT8BQ9UHF3 227 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 MXRA5Q9NR99 2828 aa14.65□□□□□ -0.06
RAB3IP-205ENST00000417413 AKAP9Q99996 3911 aa14.65□□□□□ -0.07
RAB3IP-205ENST00000417413 A0A1W2PS18 150 aa14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 A8MWL6 223 aa14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 RPL19P84098 196 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 FAM106AQ4KMX7 169 aa14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 OR4B1Q8NGF8 309 aa14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 SMR3AQ99954 134 aa14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 DAZ1Q9NQZ3 744 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 ZNF469Q96JG9 3925 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-205ENST00000417413 RBAKDNA6NC62 111 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 DNAJC9-AS1A6NH13 148 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 LGALS1P09382 135 aaKnown RBP14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 AKR1D1P51857 326 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 TMEM136Q6ZRR5 245 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 UBE2E2Q96LR5 201 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 PRR25Q96S07 402 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 JMJD8Q96S16 334 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 TLN2Q9Y4G6 2542 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 CDX1P47902 265 aaPredicted RBP14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 COX19Q49B96 90 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 SAPCD1Q5SSQ6 148 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 MRPL54Q6P161 138 aaKnown RBP14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 RHPN1-AS1Q9BWJ2 59 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 MRPL18Q9H0U6 180 aaKnown RBP14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 SMPXQ9UHP9 88 aa14.63□□□□□ -0.07
RAB3IP-205ENST00000417413 IFITM10A6NMD0 228 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 HIGD1CA8MV81 97 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 SNURFLB1AK76 121 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 COA6Q5JTJ3 125 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 GFI1BQ5VTD9 330 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 WDR73Q6P4I2 378 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 TCF24Q7RTU0 167 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 GTSF1Q8WW33 167 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 GFRA4Q9GZZ7 299 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 CLEC5AQ9NY25 188 aa14.62□□□□□ -0.07
RAB3IP-205ENST00000417413 SOCS3O14543 225 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms