RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RLN2P04090 185 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 IGLC2P0DOY2 106 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 CAMLGP49069 296 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 ZNF846Q147U1 533 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 Q6ZRG5 221 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 LINC00612Q8N6U2 182 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 SDHCQ99643 169 aaPredicted RBP10.05□□□□□ -0.8
PAF1-202ENST00000416728 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 Q9H8V8 135 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 GAGE12BA1L429 117 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 H3BQ15 152 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 J3KRW8 73 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 CCSO14618 274 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 CDK2AP2O75956 126 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 GAGE7O76087 117 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 BCAP31P51572 246 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 GUK1Q16774 197 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 CNPY1Q3B7I2 92 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 RXFP4Q8TDU9 374 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 SAT2Q96F10 170 aaPredicted RBP10.04□□□□□ -0.8
PAF1-202ENST00000416728 ZNF503Q96F45 646 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 DNAJC4Q9NNZ3 241 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 ABCA13Q86UQ4 5058 aa10.04□□□□□ -0.8
PAF1-202ENST00000416728 A0A0J9YY99 117 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 IL7P13232 177 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 LEPP41159 167 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 CAV2P51636 162 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 C20orf85Q9H1P6 137 aa10.03□□□□□ -0.8
PAF1-202ENST00000416728 LSM5Q9Y4Y9 91 aaKnown RBP10.03□□□□□ -0.8
PAF1-202ENST00000416728 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 FAM25EA8MYX2 175 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 CST7O76096 145 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 CT45A10P0DMU9 189 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 HOXA5P20719 270 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 MIC13Q5XKP0 118 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 OR1L4Q8NGR5 311 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 PFDN5Q99471 154 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 UQCC1Q9NVA1 299 aa10.02□□□□□ -0.8
PAF1-202ENST00000416728 TRAV5A0A0B4J249 113 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 WDR83OSQ9Y284 106 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 C5orf51A6NDU8 294 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 H3BNG1 76 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 ZNF253O75346 499 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 DAZ2Q13117 558 aaKnown RBP10.01□□□□□ -0.81
PAF1-202ENST00000416728 MAPKAPK5-AS1Q8N8E1 139 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 ZNF431Q8TF32 576 aaPredicted RBP10.01□□□□□ -0.81
PAF1-202ENST00000416728 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 KRTAP1-5Q9BYS1 174 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 Q9H3A6 140 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 TMPRSS5Q9H3S3 457 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 ZNF586Q9NXT0 402 aa10.01□□□□□ -0.81
PAF1-202ENST00000416728 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
PAF1-202ENST00000416728 FAM24AA6NFZ4 105 aa10□□□□□ -0.81
PAF1-202ENST00000416728 LYRM1O43325 122 aa10□□□□□ -0.81
PAF1-202ENST00000416728 PVALBP20472 110 aaPredicted RBP10□□□□□ -0.81
PAF1-202ENST00000416728 RPL29P47914 159 aaKnown RBP10□□□□□ -0.81
PAF1-202ENST00000416728 BAXQ07812 192 aa10□□□□□ -0.81
PAF1-202ENST00000416728 ESRGQ1W209 222 aa10□□□□□ -0.81
PAF1-202ENST00000416728 Q6ZTI0 123 aa10□□□□□ -0.81
PAF1-202ENST00000416728 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
PAF1-202ENST00000416728 C12orf45Q8N5I9 185 aaPredicted RBP10□□□□□ -0.81
PAF1-202ENST00000416728 MRPL53Q96EL3 112 aaKnown RBP10□□□□□ -0.81
PAF1-202ENST00000416728 SLC39A9Q9NUM3 307 aa10□□□□□ -0.81
PAF1-202ENST00000416728 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
PAF1-202ENST00000416728 TRBV19A0A075B6N1 114 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 TRAV6A0A075B6T7 132 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 A0A1W2PPQ1 181 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 M0R3E3 92 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 PLA2G10O15496 165 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 TCRBP04435 133 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
PAF1-202ENST00000416728 S100A10P60903 97 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 VWC2Q2TAL6 325 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 ZNF680Q8NEM1 530 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 C2orf50Q96LR7 162 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 C11orf1Q9H5F2 150 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 HSPG2P98160 4391 aa9.99□□□□□ -0.81
PAF1-202ENST00000416728 C7orf71A4D174 169 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 S100A11P31949 105 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 SULT1A1P50225 295 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 HBG1P69891 147 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 HBG2P69892 147 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 STX12Q86Y82 276 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 SEC22CQ9BRL7 303 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 LYRM2Q9NU23 88 aaPredicted RBP9.98□□□□□ -0.81
PAF1-202ENST00000416728 NUDT15Q9NV35 164 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 PRELID1Q9Y255 219 aa9.98□□□□□ -0.81
PAF1-202ENST00000416728 HIST1H1EP10412 219 aaKnown RBP9.97□□□□□ -0.81
PAF1-202ENST00000416728 BTF3P20290 206 aaKnown RBP9.97□□□□□ -0.81
PAF1-202ENST00000416728 ERCC8Q13216 396 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms