RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SLC39A9Q9NUM3 307 aa10.63□□□□□ -0.71
UBXN4-203ENST00000416538 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
UBXN4-203ENST00000416538 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 DEFB130BP0DP73 79 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 DEFB130AP0DP74 79 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 CDKN1BP46527 198 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 BAXQ07812 192 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 GCSAMLQ5JQS6 135 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 RNASE8Q8TDE3 154 aaKnown RBP10.62□□□□□ -0.71
UBXN4-203ENST00000416538 DNAJC4Q9NNZ3 241 aa10.62□□□□□ -0.71
UBXN4-203ENST00000416538 A6NHS1 94 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 UPK1BO75841 260 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 RPL29P47914 159 aaKnown RBP10.61□□□□□ -0.71
UBXN4-203ENST00000416538 TAS2R60P59551 318 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 B2MP61769 119 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 LINC01587Q99440 93 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 PXMP4Q9Y6I8 212 aa10.61□□□□□ -0.71
UBXN4-203ENST00000416538 PKD1P98161 4303 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 H0YIZ8 118 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 M0R3E3 92 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 NDUFB4O95168 129 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 CT45A10P0DMU9 189 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 PYYP10082 97 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 HTN1P15515 57 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 PVALBP20472 110 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-203ENST00000416538 FGF7P21781 194 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 LGALS9BQ3B8N2 356 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 GPN1Q9HCN4 374 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-203ENST00000416538 OR5AC2Q9NZP5 309 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 RNF24Q9Y225 148 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
UBXN4-203ENST00000416538 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
UBXN4-203ENST00000416538 MUC4Q99102 2169 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 J3KRW8 73 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 S100A11P31949 105 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 NHLH2Q02577 135 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 Q6ZRG5 221 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 LINC00336Q6ZUF6 198 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 STX12Q86Y82 276 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 OR1L4Q8NGR5 311 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 THAP6Q8TBB0 222 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 CHAC2Q8WUX2 184 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 C16orf74Q96GX8 76 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 PPP1R14DQ9NXH3 145 aa10.59□□□□□ -0.71
UBXN4-203ENST00000416538 RAB31Q13636 194 aa10.58□□□□□ -0.72
UBXN4-203ENST00000416538 LINC00612Q8N6U2 182 aa10.58□□□□□ -0.72
UBXN4-203ENST00000416538 ENKURQ8TC29 256 aa10.58□□□□□ -0.72
UBXN4-203ENST00000416538 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
UBXN4-203ENST00000416538 FAM167A-AS1Q96KT0 104 aa10.58□□□□□ -0.72
UBXN4-203ENST00000416538 PFDN5Q99471 154 aa10.58□□□□□ -0.72
UBXN4-203ENST00000416538 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
UBXN4-203ENST00000416538 PTTG2Q9NZH5 202 aa10.58□□□□□ -0.72
UBXN4-203ENST00000416538 TRBV19A0A075B6N1 114 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 PRSS29PA6NIE9 313 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 F5H768 121 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 H7BYZ3 331 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 ZNF253O75346 499 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 HBG1P69891 147 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 HBG2P69892 147 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 RNF212Q495C1 297 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 OR5C1Q8NGR4 320 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 OR10J6PQ8NGY7 276 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 SLC25A2Q9BXI2 301 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 TMEM14CQ9P0S9 112 aa10.57□□□□□ -0.72
UBXN4-203ENST00000416538 ATP5G1P05496 136 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 ATP5G3P48201 142 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 H2BFSP57053 126 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 ERCC8Q13216 396 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 CLINT1Q14677 625 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 GUK1Q16774 197 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 RNF141Q8WVD5 230 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
UBXN4-203ENST00000416538 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
UBXN4-203ENST00000416538 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
UBXN4-203ENST00000416538 ATP6V1FQ16864 119 aa10.55□□□□□ -0.72
UBXN4-203ENST00000416538 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
UBXN4-203ENST00000416538 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
UBXN4-203ENST00000416538 NMES1Q9C002 83 aa10.55□□□□□ -0.72
UBXN4-203ENST00000416538 CBY3A6NI87 242 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 MPDU1O75352 247 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
UBXN4-203ENST00000416538 HOXA5P20719 270 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 BTN1A1Q13410 526 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 PRR9Q5T870 116 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 ZNF493Q6ZR52 646 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 ZNRF2Q8NHG8 242 aa10.54□□□□□ -0.72
UBXN4-203ENST00000416538 BLNKQ8WV28 456 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms