RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 PIP4P1Q86T03 277 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 DSCAMO60469 2012 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 NDUFB8O95169 186 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 PPBPP02775 128 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 ASPHD1Q5U4P2 390 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 C9orf139Q6ZV77 190 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 GSN-AS1Q9NRJ2 163 aa8.56□□□□□ -1.04
COL12A1-203ENST00000416123 TRAV13-1A0A0B4J241 112 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 CFHR2P36980 270 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 COL4A3Q01955 1670 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 ATP5L2Q7Z4Y8 100 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 DTX1Q86Y01 620 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 SPCS1Q9Y6A9 102 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 CHCHD1Q96BP2 118 aaKnown RBP8.55□□□□□ -1.04
COL12A1-203ENST00000416123 PRDM13Q9H4Q3 707 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 NBL1P41271 181 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 F5H768 121 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 FAM215AQ9Y5M1 114 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 FGF16O43320 207 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 MMP23AO75900 390 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 LINC01551Q86U37 167 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 AMN1Q8IY45 258 aa8.55□□□□□ -1.04
COL12A1-203ENST00000416123 GATA3P23771 443 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 SSBP2P81877 361 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-203ENST00000416123 HCFC1P51610 2035 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 CD5P06127 495 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 TMEM14BQ9NUH8 114 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 PAX4O43316 350 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 PLNP26678 52 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 TCTEX1D4Q5JR98 221 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 ZNF562Q6V9R5 426 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 NRGNQ92686 78 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 TMEM86BQ8N661 226 aa8.54□□□□□ -1.04
COL12A1-203ENST00000416123 hDV102S1A0JD36 115 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 CEACAM8P31997 349 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-203ENST00000416123 REG4Q9BYZ8 158 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 IGLV3-9A0A075B6K5 115 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 TRAV8-2A0A0B4J237 113 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 SPRNQ5BIV9 151 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 SLC25A2Q9BXI2 301 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 TMEM158Q8WZ71 300 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 A0A096LPF7 62 aa8.53□□□□□ -1.04
COL12A1-203ENST00000416123 TECTAO75443 2155 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 JPT2Q9H910 190 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 ALPK3Q96L96 1907 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 M0R2P5 195 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-203ENST00000416123 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 MTURNQ8N3F0 131 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 SPXQ9BT56 116 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 LOXP28300 417 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-203ENST00000416123 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 VCYO14598 125 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 DAD1P61803 113 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 NDUFA4L2Q9NRX3 87 aa8.52□□□□□ -1.05
COL12A1-203ENST00000416123 ARMS2P0C7Q2 107 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 SPAG8Q99932 426 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-203ENST00000416123 NAA38Q9BRA0 125 aaKnown RBP8.51□□□□□ -1.05
COL12A1-203ENST00000416123 SHANK2-AS3Q9BTD1 123 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 TNCP24821 2201 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 TRAV9-2A0A087WT02 112 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-203ENST00000416123 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 LAMTOR2Q9Y2Q5 125 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 ZNF134P52741 427 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 DEFB136Q30KP8 78 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 Q8TCH9 128 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GHRHP01286 108 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 TMEM256Q8N2U0 113 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 AZU1P20160 251 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE1Q13065 139 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE4Q13068 117 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE5Q13069 117 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 MUC6Q6W4X9 2439 aa8.51□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE12BA1L429 117 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE7O76087 117 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE12FP0CL80 117 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 Q6ZS49 121 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 SHISA9B4DS77 424 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 TMEM213A2RRL7 107 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 OR2K2Q8NGT1 345 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 SRSF8Q9BRL6 282 aaKnown RBP8.5□□□□□ -1.05
COL12A1-203ENST00000416123 IGLV1-44P01699 117 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 LMO1P25800 156 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 MORN3Q6PF18 240 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms