RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 POLEQ07864 2286 aa1.79□□□□□ -2.12
HMGB1P11-201ENST00000413899 TLN1Q9Y490 2541 aaKnown RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 RIF1Q5UIP0 2472 aaKnown RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 PKDREJQ9NTG1 2253 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 PLXNB1O43157 2135 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 LOC105371267A0A1B0GV96 52 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 A0A1W2PRD5 423 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 TMEM218A2RU14 115 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 RAB19A4D1S5 217 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 E7EUB6 86 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 C19orf84I3L1E1 186 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 SYNGR2O43760 224 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 YPEL1O60688 119 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 FSTL3O95633 263 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 CRYZL1O95825 349 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 TRBV12-3P01733 135 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 GYPAP02724 150 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 OR4A8P0C604 315 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 SEC11BP0C7V7 166 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 IAPPP10997 89 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 DEFA4P12838 97 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 G6PCP35575 357 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 NUP62P37198 522 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 SNCAP37840 140 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 ZNF137PP52743 207 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 AKR1C2P52895 323 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 CMC4P56277 68 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 OR2B8PP59922 312 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 CCL20P78556 96 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 AKR1C1Q04828 323 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 TNFRSF9Q07011 255 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 DIAPH2-AS1Q14236 149 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 RPEL1Q2QD12 228 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 BSXQ3C1V8 233 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 THOC7Q6I9Y2 204 aaKnown RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 HCP5Q6MZN7 132 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 ZNF833PQ6ZTB9 187 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 PDZD9Q8IXQ8 264 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 OR5C1Q8NGR4 320 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 ITLN2Q8WWU7 325 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 RNASE6Q93091 150 aaKnown RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 ARL11Q969Q4 196 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 YPEL2Q96QA6 119 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 CCL13Q99616 98 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 PARD6GQ9BYG4 376 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 VSIRQ9H7M9 311 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 OR2S2Q9NQN1 319 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 PARP11Q9NR21 331 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 TMEM106BQ9NUM4 274 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 IDI2-AS1Q9NZ38 188 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 GSKIPQ9P0R6 139 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 KAAG1Q9UBP8 84 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 CACFD1Q9UGQ2 172 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 RPUSD1Q9UJJ7 312 aaKnown RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 TRAPPC2LQ9UL33 140 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 LINC00312Q9Y6C7 94 aa1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 DSPP15924 2871 aaKnown RBP1.78□□□□□ -2.12
HMGB1P11-201ENST00000413899 BOD1L1Q8NFC6 3051 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 ITPR1Q14643 2758 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 ZFHX2Q9C0A1 2572 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 PTPRZ1P23471 2315 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 URB1O60287 2271 aaKnown RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 ICE1Q9Y2F5 2266 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 DMXL2Q8TDJ6 3036 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGKV1OR2-108A0A075B7D4 117 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TRAV1-1A0A0B4J248 108 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TRAV25A0A0B4J276 109 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGKV2-24A0A0C4DH68 120 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 UBE2L5PA0A1B0GUS4 154 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 ZNF729A6NN14 1252 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 LYNX1G3V0Z9 82 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 LY6LH3BQJ8 138 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 M0R1X1 148 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 WRBO00258 174 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TOR1AO14656 332 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SNAPC5O75971 98 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 CST7O76096 145 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 LY6HO94772 140 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 ATG12O94817 140 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 IFNA21P01568 189 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGHV3-7P01780 117 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGKV1-16P04430 117 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SOD3P08294 240 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SRP19P09132 144 aaKnown RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 METTL15P1P0C7V9 234 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 P0C880 135 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SAA1P0DJI8 122 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 LYNX1P0DP58 116 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 GNG10P50151 68 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SULT1A1P50225 295 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 EDDM3BP56851 147 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TAS2R30P59541 319 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 RAB2AP61019 212 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 CCL8P80075 99 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 BAXQ07812 192 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SLC38A11Q08AI6 406 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 LTC4SQ16873 150 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SPINK9Q5DT21 86 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms