RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ZNF418Q8TF45 676 aaPredicted RBP1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 GGACTQ9BVM4 153 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 SMIM3Q9BZL3 60 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 C14orf132Q9NPU4 83 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 MED9Q9NWA0 146 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 EIF4G3O43432 1585 aaKnown RBP1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 FAM135AQ9P2D6 1515 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 BCL9LQ86UU0 1499 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 CEP164Q9UPV0 1460 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 PRG4Q92954 1404 aaPredicted RBP1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 ZFC3H1O60293 1989 aaKnown RBP1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 MYH9P35579 1960 aaKnown RBP1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 MYH6P13533 1939 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 CST7O76096 145 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 IGF2P01344 180 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 CXCL1P09341 107 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 TSPAN19P0C672 248 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 S100PP25815 95 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 PDE6HQ13956 83 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 TMEM14EPQ6UXP3 125 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 TSTD1Q8NFU3 115 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 CBLN4Q9NTU7 201 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 TCOF1Q13428 1488 aaKnown RBP1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 MRC2Q9UBG0 1479 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 DIDO1Q9BTC0 2240 aaKnown RBP1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 ERBINQ96RT1 1412 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 ATG2AQ2TAZ0 1938 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 CEP192Q8TEP8 1941 aa1.74□□□□□ -2.13
HMGB3P31-201ENST00000413333 NISCHQ9Y2I1 1504 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 IGKV2-40A0A087WW87 121 aaPredicted RBP1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 TRBV6-8A0A0A6YYG3 113 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 A8MWV9 139 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 ATP6V1G2-DDX39BF2Z307 99 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 M0R2Z0 102 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 IGKV2D-40P01614 121 aaPredicted RBP1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 HLA-EP13747 358 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 SDC2P34741 201 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 TMBIM6P55061 237 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 ARPP19P56211 112 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 NCS1P62166 190 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 HBBP68871 147 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 EMX2Q04743 252 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 OR4S1Q8NGB4 309 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 OR51A4Q8NGJ6 313 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 NAT14Q8WUY8 206 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 ZNF714Q96N38 554 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 LINC00467Q9BRT7 94 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 LXNQ9BS40 222 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 LINC00470Q9BZP3 86 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 LPAR5Q9H1C0 372 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 CYSTM1Q9H1C7 97 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 TCEAL2Q9H3H9 227 aaPredicted RBP1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 SOX21Q9Y651 276 aaPredicted RBP1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 SNURFQ9Y675 71 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 ARFGEF3Q5TH69 2177 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 ALPK2Q86TB3 2170 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 MYO5AQ9Y4I1 1855 aaKnown RBP1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 DISP2A7MBM2 1401 aa1.73□□□□□ -2.13
HMGB3P31-201ENST00000413333 FRMPD1Q5SYB0 1578 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 TANC2Q9HCD6 1990 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 UHRF1BP1LA0JNW5 1464 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 HYPMO75409 117 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 IFNGP01579 166 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 MT-ND4LP03901 98 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 RPL22P35268 128 aaKnown RBP1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 ZNF93P35789 620 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 RPL35P42766 123 aaKnown RBP1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 RPS25P62851 125 aaKnown RBP1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 SELENOWP63302 87 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 TMEM244Q5VVB8 128 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 HAGHLQ6PII5 290 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 IDO2Q6ZQW0 420 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 LINC00305Q7Z4B0 112 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 ARL11Q969Q4 196 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 TMEM203Q969S6 136 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 C12orf57Q99622 126 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 KLK9Q9UKQ9 250 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 FGD6Q6ZV73 1430 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 MED13Q9UHV7 2174 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 RTL9Q8NET4 1388 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 CCNB3Q8WWL7 1395 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 MYH13Q9UKX3 1938 aa1.72□□□□□ -2.13
HMGB3P31-201ENST00000413333 DSPPQ9NZW4 1301 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 SCN3AQ9NY46 2000 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 GRIN2AQ12879 1464 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 IGKV3-7A0A075B6H7 116 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 TRBV27A0A0K0K1C4 114 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 C9orf170A2RU37 121 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 K7ERJ3 54 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 K7ERU9 68 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 HCRTO43612 131 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 HIST1H2BKO60814 126 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 NCR2O95944 276 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 HIST1H2BJP06899 126 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 IGLC6P0CF74 106 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 LINC00694P0DN24 101 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 FABP2P12104 132 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms